| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5639 |
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| Symbol | |
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| ID | 7975251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 346196 |
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| End bp | 347674 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796223 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_002947497 |
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| Protein GI | 239820312 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTGA CACTTGAACG CCAGGACCTG CTGCCCGGCC AGCACCTCAT CGGCGCCGAA
TGGCGCGAAG CCAGCGACGG CCGCCGCCTC GACGTGACCG ACCCCGCCAC CGATGGCGTC
TTTGCGAGCG TGCCCGACGG CACCGCCGCC GACGCGCGCG CCGCGGTGAA TGCCGCGCAT
GCCGCCTTCC CCGCCTGGCG CGCCGTGCCG GCCAAGCAGC GCGCGCAGAT CCTCAAGCGC
TGGAACGACC TGATGCTCGC GCACCAGGAA GACCTGGGCC GCCTCATCTC GCGCGAGCAG
GGCAAGCCGC TGGCCGAAGG CCGTGGCGAA GTGGCCTATG CAGCGAGCTA CGTCGAATGG
TTCGGCGAAG AAGCCACGCG CGCCAACGGC GACGTGATTC CCGCACCCGT CACGGGCCGC
CGCATGCTCG CGCTGAAGGA GCCGGTCGGT GTGGTCGCCG CGATCACGCC GTGGAACTTT
CCGGCCGCGA TGATCGCGCG CAAGATCGCG CCCGCGCTGG CCGCGGGCTG CACCGTGGTG
TGCAAGCCGG CCGAGGACAC GCCGCTGACC TCGCTCGCGC TCGTCAGGCT CGCGCAGGAG
GCCGGCGTGC CCGCAGGCGT GCTCAACATC GTCACGGCTT CGCGCGACCG CACGCCCGAG
GTGGTCGACG TATGGCTGGC CGATGCGCGG GTGCGCAAGA TCAGTTTTAC CGGCTCCACG
CCGGTCGGCA AGCACCTGGC ACGCGCCTCG GCCGACACGC TCAAGAAGCT GTCGCTCGAG
CTCGGCGGCA ATGCGCCGTT CATCGTGTTC GAGGATGCCG ACGTCGATGC CGCGGTCGAA
GGTCTGATGG CCGCCAAGTT CCGCAACGGC GGCCAGACCT GCGTGTGCCC GAACCGCGTG
TTCGTGCAGG CCAGGGTGCA CGACGCCTTC GTCGACAAGC TGGCCGCGCG GGTCAGCGCG
CTCAAGGTCG GCCCGGCGAC GGCGCCCGAC TCACAGATCG GCCCGATGAT CAACGCACGC
GCGGTCGACA AGATCGAGCG CCACGTGCGC GACGCCGTGG CCCGCGGCGC GCGCATCGTG
GTCGGCGGCG AACGGCTGCG CTCCGCACGC TGCGACGGCC CCAACTACTA CGCGCCGACC
GTGCTCGTGA ACGCCGATGC GGGCATGGAT TGCAGCTGCG AAGAGACCTT CGGGCCGGTG
GTGCCGGTCA CGCGCTTCGA GACCGAGGCC GAGGTGATCG CGGCTGCCAA CGACACGCCC
TTCGGCCTGG CCGCCTACTT CTATTCGACC GACGTGCGCC GCATCTGGCG CGTGGCCGAG
GCGCTCGAAT CCGGCATCGT CGGCATCAAC GAAGGCGCGC TGGCCGCGGA GGCCGCGCCC
TTCGGCGGCG TGAAGGAGTC GGGCTACGGG CGCGAAGGCT CGGTGCACGG GCTCGACGAT
TACATGCACA CCAAGTACCT GTGCCAGGGC GGGCTTTGA
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| Protein sequence | MTLTLERQDL LPGQHLIGAE WREASDGRRL DVTDPATDGV FASVPDGTAA DARAAVNAAH
AAFPAWRAVP AKQRAQILKR WNDLMLAHQE DLGRLISREQ GKPLAEGRGE VAYAASYVEW
FGEEATRANG DVIPAPVTGR RMLALKEPVG VVAAITPWNF PAAMIARKIA PALAAGCTVV
CKPAEDTPLT SLALVRLAQE AGVPAGVLNI VTASRDRTPE VVDVWLADAR VRKISFTGST
PVGKHLARAS ADTLKKLSLE LGGNAPFIVF EDADVDAAVE GLMAAKFRNG GQTCVCPNRV
FVQARVHDAF VDKLAARVSA LKVGPATAPD SQIGPMINAR AVDKIERHVR DAVARGARIV
VGGERLRSAR CDGPNYYAPT VLVNADAGMD CSCEETFGPV VPVTRFETEA EVIAAANDTP
FGLAAYFYST DVRRIWRVAE ALESGIVGIN EGALAAEAAP FGGVKESGYG REGSVHGLDD
YMHTKYLCQG GL
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