| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5637 |
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| Symbol | |
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| ID | 7975249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 343428 |
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| End bp | 345080 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796221 |
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| Product | ABC transporter related |
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| Protein accession | YP_002947495 |
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| Protein GI | 239820310 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGCAC CACTCACTGT CCAGGGCCTC AGCATCGTGG CCGGCGCGAA CACGCTGGTC
GACAACCTGA GCTTCTCGGT GCAGCCCGGC GAAGTGCTGG CACTGATCGG TGAATCGGGC
TCGGGCAAGA CCACCACCGC GCTCGCGCTG ATGGGCTATG CACGCAGCGG CTGCCGCATC
TCGGCCGGCC GGGTGCAGAT CGGCGACACC GACGTGCTGG CACTCGATGC GGCGCGGCAG
CGCGGGCTGC GCGGCCGCAC GGTTTCCTAC ATCGCGCAGA GCGCGGCCGC CTCCTTCAAT
CCTTCGCGCA CGATCATGGA CCAGGTGGTC GAGCCCACCG TCATCCACGG CCTGTGCAAG
CGGGCCGAGG CCGAGGCCAA GGCGGTGCAG CTGTTCCGCG AGCTGGCGCT GCCCGACCCG
GAGAACATCG GCGCGCGCTA TCCGCACCAG GTCTCTGGCG GCCAGCTGCA GCGGCTGATG
GCGGCCATGG CGCTGATCGG CGATCCCGAG CTCGTGATCC TCGACGAGCC GACCACCGCG
CTCGACGTGA CCACGCAGAT CGAGGTGCTG CGCGCCTTCC GCCGCGTGGT GCGCGAGCGC
CGCGCCACCG CCGTGTACGT GAGCCACGAC CTGGCCGTGG TCGCGCAAAT GGCCGACCAC
ATCCTGGTGC TTCGCAATGG CCGGATGAGC GAGCTCAACG CCACCGGGCA GATCCTTGCC
GCCCCGGCCG ACGACTACAC CAAGTGCCTG CTCGCGGCCG CGCGGCCCGC GGTGCGCGCC
TCCGGACAGG CCTCGGGCGA TTCCGCGCTT CTGCTTCACG TGGACCAGCT TTCATGCGGC
TACGGCGCGG TGGACGCCAA GGGCCAGCCG GCCAAGATCA TCCTGGAGGA CATCAACCTG
AAGCTCTACC GCGGCCAGGC CATTGGCGTG ATCGGCGAAT CGGGCTCGGG CAAGACCACG
CTGGCACGGG CCGTTGCCGG GCTTCTGAAG CCCTGCCATG GCAGCGTCGC GTTCGACGGC
CACGCGCTCG CGCCCACGCT GCAGCAGCGC GATCGCGAGC AGCTGCGCCG CATCCAGATC
GTGTTCCAGA TGGCCGACAC GGCGCTCAAC CCTTCGCAGA CCATCTGGCG CATCCTGGCG
CGGCCGCTGC AGTTCTACAA GGGCCTGCGC GGCGAGCCGC TCAAGCAGCG CATCTTCGAG
CTGCTCGATC TCGTGAAGCT GCCGCGCACG GTGGCCGACC GCTTGCCGGG CGGGCTCTCG
GGCGGGCAGA AGCAGCGCGT GAACCTGGCG CGCGCGCTGG CGGCCGAGCC CGACCTCATC
CTGTGCGACG AAGTGACCTC GGCGCTGGAC ACCGTGGTGG CCGCGGCGGT GCTCGACCTC
ATGGCCGAGC TGCGGCGCGA GCTCGGCGTG TCCTATCTCT TCATCAGCCA CGACCTGCAC
ACGGTGCGCT CGGTGTGCGA CGAGATCGTG GTGATGCAGC ACGGCCGCAA GCTCTCGCAG
GTGGCGCGTG CCGACTACGA GCGCGGGCCG CACCATCCCT ACTACGAACT GCTGGCGCGT
TCCGTGCCCG AGCTGCGCCA GGGCTGGCTC GACGACATGG ACCACGCAGC AGCAGCAGCA
GCCACGCCAT CAACCAGGGA AGCACTCGCA TGA
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| Protein sequence | MGAPLTVQGL SIVAGANTLV DNLSFSVQPG EVLALIGESG SGKTTTALAL MGYARSGCRI
SAGRVQIGDT DVLALDAARQ RGLRGRTVSY IAQSAAASFN PSRTIMDQVV EPTVIHGLCK
RAEAEAKAVQ LFRELALPDP ENIGARYPHQ VSGGQLQRLM AAMALIGDPE LVILDEPTTA
LDVTTQIEVL RAFRRVVRER RATAVYVSHD LAVVAQMADH ILVLRNGRMS ELNATGQILA
APADDYTKCL LAAARPAVRA SGQASGDSAL LLHVDQLSCG YGAVDAKGQP AKIILEDINL
KLYRGQAIGV IGESGSGKTT LARAVAGLLK PCHGSVAFDG HALAPTLQQR DREQLRRIQI
VFQMADTALN PSQTIWRILA RPLQFYKGLR GEPLKQRIFE LLDLVKLPRT VADRLPGGLS
GGQKQRVNLA RALAAEPDLI LCDEVTSALD TVVAAAVLDL MAELRRELGV SYLFISHDLH
TVRSVCDEIV VMQHGRKLSQ VARADYERGP HHPYYELLAR SVPELRQGWL DDMDHAAAAA
ATPSTREALA
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