| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5628 |
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| Symbol | |
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| ID | 7975240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 332949 |
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| End bp | 333443 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644796212 |
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| Product | transcriptional regulator, AsnC family |
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| Protein accession | YP_002947486 |
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| Protein GI | 239820301 |
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| COG category | [K] Transcription |
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| COG ID | [COG1522] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAG CTTTCAAGAT CGACCGACTC GACCTGCGCA TCCTGGCCCA GCTGCAGCAG
AACGGGCGCA TGACCAACGT CGACCTCGCG GATGCGGTCG GCCTGTCGCC CAGCCCCTGC
CTGATCCGCG TCAAGCGCCT GGAGCAGGCC GGCTACATCG CCGGCTACGG CGCGCACCTG
CGGCTCGAGA AGCTCGGCGA CACGCTCACC GTGTTCACCG AGGTCACGCT GCAAGACCAC
CACCGCGAGG ACTTCGTGCG CTTCGAGGCC GCGATCCGCG AGGTCGACGA GGTGCTCGAA
TGCCACCTGG TGAGCGGCGG CTACGACTAC CTGCTGCGGT TCTTGACGCG CGGCGTCAAC
CACTACCAGG AAGTGATCGA GGAACTGCTC GAGCGCAACA TCGGCATCTC CAAGTACTTC
AGCTACATCG TCATCAAGTC GCCGTTCATC AAGACGCATT GCCCGATCGA ACGGCTGTTT
CCGCATCCGC GCTGA
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| Protein sequence | MSEAFKIDRL DLRILAQLQQ NGRMTNVDLA DAVGLSPSPC LIRVKRLEQA GYIAGYGAHL
RLEKLGDTLT VFTEVTLQDH HREDFVRFEA AIREVDEVLE CHLVSGGYDY LLRFLTRGVN
HYQEVIEELL ERNIGISKYF SYIVIKSPFI KTHCPIERLF PHPR
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