| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5626 |
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| Symbol | |
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| ID | 7975238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 331604 |
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| End bp | 332047 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644796210 |
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| Product | protein of unknown function DUF1486 |
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| Protein accession | YP_002947484 |
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| Protein GI | 239820299 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5485] Predicted ester cyclase |
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| TIGRFAM ID | [TIGR02096] conserved hypothetical protein, steroid delta-isomerase-related |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGACG ATGTGAAGGC CCGAAACAGC CAACTGATCC GGGCACTCTA TGAAGACTGG
TTGTCGCACG GGCGCTTCGA AGAGCTGCAG GACTCGATCG CGGATGACTA CGTGGGGCCC
AACGGCGAAA AAGGCGCCGC AGGCTTTGCG ACGACCATGA ACGGCTTGCG CAGCGCCTTT
CCGGACATCC GCTTCCAGGT CGAGGACCTG ATCGCCGAGC CGGACAAGGT CGCAGTGCGC
TGGCGCTGGC AGGCCATTCA CGCAGGCGAG TTCCGCGGCC TGGAAGCGTC GCACCGCCGA
GTGGAGAACA CAGGCATTGC CATCTACCAC TTGCGCCACG GCAAGATCGT GCGCTCCTGG
CTGGAAACCG ACCGGCTGGG TGCGCTGCAG CAGATTGGCG CACTTCCTGC CGGCGTGGGT
GCTTCGCCTC CGCGCAGCAA CTAG
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| Protein sequence | MQDDVKARNS QLIRALYEDW LSHGRFEELQ DSIADDYVGP NGEKGAAGFA TTMNGLRSAF
PDIRFQVEDL IAEPDKVAVR WRWQAIHAGE FRGLEASHRR VENTGIAIYH LRHGKIVRSW
LETDRLGALQ QIGALPAGVG ASPPRSN
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