| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5615 |
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| Symbol | |
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| ID | 7975227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 321783 |
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| End bp | 323522 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644796199 |
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| Product | fumarate reductase/succinate dehydrogenase flavoprotein domain protein |
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| Protein accession | YP_002947473 |
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| Protein GI | 239820288 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTCG AGACTTACAA GACCGATATC CTGGTGCTGG GAACCGGTGG TGCCGGCCTG
TTTGCTGCCC TGCATGCCAA GAAGGCGAAT CCTTCCCTGC GCGTCACGGT CACGGTCAAG
GGTTTGCTTG GAAAGTGCGG ATGCACACGC ATGGTCCAGG GCGGCTACAA CGTGGCACTG
TCGGCTGGAG ATTCGGTTGA GCGGCACTTC ATGGACACCA TTGAGGGCGG CAAGTGGCTG
CCGCGTCAGG ATCTCGCATG GCGCCTCGTG GAAGGGGCCG TCGAGCGCGT GCGCGAACTC
GAGAACGAGA TCGGGTGCTT CTTTGACCGC AATCCCGACG GGTCGCTCCA TTCGAAAGCC
TTTGCGGGCC AGAGCTTCGA TCGCACGGTC CACAAGGCCG ACCTGACGGG CATCGAGATC
ATCAACCGCC TCATGGAGCA GGTGCGCGCG ATGGACGTCG AGGAGCTTGA GGAGCATCGT
GCGATCGAGC TCATTCCGGC GGCCGATGGA TCCGGAATCG CCGGTGTCCT GTTCATTGAC
ATGCGTGCAG GTACCTATCG CCTGGTGCAG GCAAAGGCGG TGCTCCTTGC GACGGGCGCC
GGGCCGACGA TGTACCGCTA TCACACACCG TCCGGCGACA AGACCTGCGA TGGTCTGGCC
ATGGCGCTTC GGTACGGCCT GAAGCTCCGG GATATGGAGA TGGTGCAGTT CCATCCCACC
GGACTCCTCG GCGGACCGGA TACGCGTATG ACGGGCACCG TTCTCGAGGA GGGCTTGCGC
GGCGCCGGTG GTTACCTGCT CAATGGGAAC GGCGACCGGT TCATGACCCA CTACGACAAG
CGTGGCGAGC GTGCGACCCG CGACGTCGTC AGTCGAGGCA TCTACGCCGA GATGCGCGCG
GGGCGTACGG GGCCGATGGG TGGCGTCTAC ATCCAGATGA GCCACCTCGG CCCGGAGAAG
GTCGCCAAGA CCTTTCCTGG AATGGTCAAT CGCTGCAAGG ACTGCGGCTT TGATCTGGCA
GGTGGCAAGG TCGAAGTGGT TCCGACAGCC CACTACCTGA TGGGGGGTGT CGAGTTCAAC
GTCGACTGCT CGACCGCATC GCCAGGACTG TTCGCTGCGG GCGAGGACTG CGGAGGCGTC
CATGGGGCCA ATCGCCTCGG CGGCAACGGT GTCGCGAACT CCACCGTCTT TGGCGGCATT
GCGGGAGACT CCATGGCCGC CTTCGTCGAG AGGAACGGCA AGTGGCGCGA CCCCGACAGG
CGAATCGTCG CCAGCGGGAT CGAGCGCGCG GAGTATCCGT TCTCCAGGCC GGCGGGTCGT
ATCCACGAGT TGCGCGACGC CCTGGCACAG ACGATGTGGG ATGACGTTGG TGTGCTGCGC
AACCGTGAGG CGATGGACCA TGGGCTCGAA GCGGTGGCTT CTCATCGAGC CGCGCTGTCG
GCGATGGGCG TCGCAGATGG CGATCGCCGC TACAACGTGA CCTGGCACGA CTGGCTGAAC
CTGGAAAGCC TCGTCGATAT CTCAAAGATC ATTACCGTCT CCGCGCTGGC ACGCGAGAAC
AGCCGGGGCG CTCATTTTCG CGAAGACTTC CCCGACCCGG GCGATCTCCA CTCCAGCTGC
TACACGCGCG TGAGCGCCCG GGACGACCAT GTACAGCTCG AAATGATTCC CGTCTCCTTC
GACATCGTGA GACCCGGTGA ATCGCTCATC ACCGGCGAAG CAGTCACCCC CAAAACCTGA
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| Protein sequence | MNFETYKTDI LVLGTGGAGL FAALHAKKAN PSLRVTVTVK GLLGKCGCTR MVQGGYNVAL
SAGDSVERHF MDTIEGGKWL PRQDLAWRLV EGAVERVREL ENEIGCFFDR NPDGSLHSKA
FAGQSFDRTV HKADLTGIEI INRLMEQVRA MDVEELEEHR AIELIPAADG SGIAGVLFID
MRAGTYRLVQ AKAVLLATGA GPTMYRYHTP SGDKTCDGLA MALRYGLKLR DMEMVQFHPT
GLLGGPDTRM TGTVLEEGLR GAGGYLLNGN GDRFMTHYDK RGERATRDVV SRGIYAEMRA
GRTGPMGGVY IQMSHLGPEK VAKTFPGMVN RCKDCGFDLA GGKVEVVPTA HYLMGGVEFN
VDCSTASPGL FAAGEDCGGV HGANRLGGNG VANSTVFGGI AGDSMAAFVE RNGKWRDPDR
RIVASGIERA EYPFSRPAGR IHELRDALAQ TMWDDVGVLR NREAMDHGLE AVASHRAALS
AMGVADGDRR YNVTWHDWLN LESLVDISKI ITVSALAREN SRGAHFREDF PDPGDLHSSC
YTRVSARDDH VQLEMIPVSF DIVRPGESLI TGEAVTPKT
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