| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5614 |
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| Symbol | |
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| ID | 7975226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 320835 |
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| End bp | 321770 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644796198 |
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| Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit |
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| Protein accession | YP_002947472 |
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| Protein GI | 239820287 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCC CGATTCAGAA AGTTGAAGAA GCCGCCTTGG AGATCACGCG ACGCGCTGCG
ATCGAGATTC CTCCCGACTA CAAGAAGGGA ATTCAGGAAC TGCAGAAGAC GGAGACCGGA
AAACTGCCCC GGTTCGTCAT CCACGCGATG GTCGACAACT GGGAGGCCGC AGATCAGGAT
CGCCGTCCCA TGTGCGCCGA TACCGGCCTG CCGCGGTATT ACGTGAAGGT CGGCAACAAC
GCATCGGTCG AGTCGGGATT CGTTGCCGTG GAGCGAGCGC TCCGGCATGC GACGGCAGAA
GGTACGGTCA CGATTCCGCT TCGGCCGAAT CGCGTGCATC CCTTGTGGCG CACAGATCAC
AACAACAACG TCGGCATCAA TGCCCCCGAA GTCGAGTGGT CGTTCGAGCC GGAGGCCGAC
TGGATCGACG TCACCACCAT CCACAAAGGC GGCCTCTTCG GGACCGACTA CCGCATGCTG
TTCCCCGGGG ACGGAATCGA CGGTATCAAG CGCTTTGTCC TGGACACGCT GATTGCCTTC
GGAAAGCGCG GCTTGGCCTG CCAGCCCGCG ATCGTCGGGA TCGGCCTGGG TGGGTCCAAG
GACACCTGCA TGCAGCTGGG CAAACAGGCT GCGTGCCTTC GCACGGTCGG GGATCGGAAT
CCCGATCCGA AGGTCGCCGA GCTCGAACTC GAGTTGATGA AGCTCGGAAA CTCGATCGGG
ATGGGCGCCA TGGGCTTTGT GGGGTCCGGG ATGGTCGTGG ATTGCCACAT CGAGTGCGGT
TATACGCACA CCGGTGGCAT GCCCATCAGC CTGCACACCT TCTGTCTTTC GTCACGGCGT
GCCACAGCGC GCATCCATGC CAACGGCGAG ATCGAGTATC GAACCGATCC CCAATGGTTC
ACCCCCTATC TGCGTCGGGA GACAGTCGAA TGGTAA
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| Protein sequence | MKIPIQKVEE AALEITRRAA IEIPPDYKKG IQELQKTETG KLPRFVIHAM VDNWEAADQD
RRPMCADTGL PRYYVKVGNN ASVESGFVAV ERALRHATAE GTVTIPLRPN RVHPLWRTDH
NNNVGINAPE VEWSFEPEAD WIDVTTIHKG GLFGTDYRML FPGDGIDGIK RFVLDTLIAF
GKRGLACQPA IVGIGLGGSK DTCMQLGKQA ACLRTVGDRN PDPKVAELEL ELMKLGNSIG
MGAMGFVGSG MVVDCHIECG YTHTGGMPIS LHTFCLSSRR ATARIHANGE IEYRTDPQWF
TPYLRRETVE W
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