| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5613 |
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| Symbol | |
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| ID | 7975225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 320161 |
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| End bp | 320841 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644796197 |
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| Product | Fe-S type hydro-lyase tartrate/fumarate beta region |
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| Protein accession | YP_002947471 |
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| Protein GI | 239820286 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain |
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| TIGRFAM ID | [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAGCA GCAACGACGA CATCAAAGTC TTCCACCTGA ACCTTCCGGC GAAGCGGGAA
GACATTGCGA AGCTCGAGTT GGGCTGCGCG GTCTGTCTGA ACGGCGTGGT CTACACCGCG
CGCGAGGGTG TCTACAAGAA GGTGCTGGAC GAGGGATTGG CGCTGCCCGT CGATCTGAAG
TCGATCAGCA ACGTCAACTT CCACTGCTCG CCGGCCGCCG CACCCGACGG CAAGGGAGGC
TACAGGGTCG GCGCTGTGAC CGCCACGGCA TCCTTTCGCT TTTCGAAGTG GATTCCTCGC
TGGCTCGAAC AGACAGGGTG CAGCATCCTC ATCGGAAAAG GAGGCATGCC TGCCGATGAC
TACAAGAAGG TGCTCGCTCC GGGTGGCGCC ATCTACCTGA CAACCGTCGG CTACGGCACC
GGTGCGCTGC TTGGTCGCGG CATCAAGCGT GTCCGGGAGG TGCACTGGCT CGACGAGCTG
GGGATCGCCC AGGCCATGTG GTTGTTCGAG GTGGAGAACT TCGGTCCCTT CATCGTCGAG
AGCGACCTGG AGGGCAACTC CTTGTTCGCG CAGCATGCCG AGACCATCAA TGCAGGCATC
GAGGCTCTGT ATGCAGGTCT CAAGCCTCCA GCGCTGCATC GCTACGGGGA GACCGACAAC
CGCAAGGACG AGGTGATGTA G
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| Protein sequence | MVSSNDDIKV FHLNLPAKRE DIAKLELGCA VCLNGVVYTA REGVYKKVLD EGLALPVDLK
SISNVNFHCS PAAAPDGKGG YRVGAVTATA SFRFSKWIPR WLEQTGCSIL IGKGGMPADD
YKKVLAPGGA IYLTTVGYGT GALLGRGIKR VREVHWLDEL GIAQAMWLFE VENFGPFIVE
SDLEGNSLFA QHAETINAGI EALYAGLKPP ALHRYGETDN RKDEVM
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