Gene Vapar_5609 details

Gene Information

• Locus tag: Vapar_5609
• ID: 7975221
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: -
• Start bp: 316346
• End bp: 317101
• Gene Length: 756 bp
• Protein Length: 251 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 644796193
• Product: protein of unknown function DUF81
• Protein accession: YP_002947467
• Protein GI: 239820282

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCACTAT CACCTGAACT CGTTGCAGTT GCTGCGCCCA TCGTCTTCGT CGCATACGCC 
GTATTCGGAA TGACCGGATT CGGTGCGGCA ATGGTGGCCG TGCCCATGCT GGTCCAGTTC 
ATCCCGCTTC AGGTGGCAGT GCCTCTGGTG GTTCTCTTCG ATCTGGTGGC GACATCGATG 
GTAGGTGGCA AGAACTGGGG CAGCGTTTCC ACGCTGGAGT TGAAGCACCT GTTGCCGCCC 
ATGCTGTTGG GAATCGCCAT AGGGGTGGTG GTGCTCCACA ACGTGGGGCC GAGATGGCCG 
CTGGTGGGCC TCGGCGTCTT CGTGCTGGTT GTCAGCGTTC GCAATCTGCT GGCCAGCGGT 
TCAGCGGCAA GGCCGCAGCT CGCCAGGGTA TGGTCCTTGC CGTTGGGAAT GGCTGGCGGC 
GTGTTCAGCG CGCTGTTTGG TACCGGGGGC CCGATCTATA CGATCTATCT GGCCAGACGG 
CTATCTGATG TCGACCGCTT CAGGGCGACG ATTGCCGTCG TGATCCTTCT GAGTGGGATC 
AGCCGCGCCG CCGCGTTTGG TGTGGCAGGT CTTTATGGAA AGGACTCCAT CCTGGGATTG 
GCTTGCGTCC TTCTCCCGAT GTCCTTGCTG GGACTCTTCG TGGGTTCGAA GGCCAGGACC 
CTGGTGTCGC CTGGGCGCTT GAAGCGCCTT GTCCTGCTGC TCTTGTCGGC CGCTGGCGCT 
GGTGCCATCT ACCGCGGTTT GGCCGTAAGC GGTTGA 

 

Protein sequence

MPLSPELVAV AAPIVFVAYA VFGMTGFGAA MVAVPMLVQF IPLQVAVPLV VLFDLVATSM 
VGGKNWGSVS TLELKHLLPP MLLGIAIGVV VLHNVGPRWP LVGLGVFVLV VSVRNLLASG 
SAARPQLARV WSLPLGMAGG VFSALFGTGG PIYTIYLARR LSDVDRFRAT IAVVILLSGI 
SRAAAFGVAG LYGKDSILGL ACVLLPMSLL GLFVGSKART LVSPGRLKRL VLLLLSAAGA 
GAIYRGLAVS G