| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5607 |
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| Symbol | |
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| ID | 7975219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 314672 |
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| End bp | 315406 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644796191 |
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| Product | ABC transporter related |
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| Protein accession | YP_002947465 |
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| Protein GI | 239820280 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGACA TCAACCAGGT GAGCAAGTGG TACGGCGCGT TCCAGGTGCT GACCGATTGC
ACGACGCGCA TCCGCAAAGG CGAGGTTGTC GTGGTCTGCG GGCCATCGGG TTCGGGCAAG
TCCACCTTGA TCAAGTGCGT GAACGCGCTG GAGCCCTTCC AGCAGGGCAG CATCACGGTC
GACGGGGCCT CGGTGGGCGA TCCGAAGATC GACCTCAACC GGCTGCGCTC GCGCGTGGGC
ATGGTGTTCC AGCACTTCGA GCTGTTTCCT CATCTCTCGA TCGAGCAGAA CCTCTCGATC
GCGCAGGTCA AGGTGCTCAA GCGCTCGTCG AGCGAGGCGC GCACCCGCTC CATGGCGCTG
CTCGAGCGCG TCGGCATGAA GGCCCATTCG CACAAGTTTC CCTCGCAACT CTCGGGCGGC
CAGCAACAGC GCGTGGCCAT CGCACGCGCG CTGGCGATGG ACCCGATCGC CATGCTGTTC
GACGAGCCCA CCTCTGCCCT CGACCCCGAG ATGGTCAACG AGGTGCTCGA CGTGATGGTT
CAGCTGGCGT GCGAAGGCAT GACCATGATG TGCGTGACCC ATGAGATGGG CTTTGCGCGC
AAGGTGGCCA GCCGCGTGAT CTTCATGGAC CGCGGCAGCA TCGTCGAAGA TTGCCCGAAG
GAAGAGTTCT TTGGCAACCC GGCTGCGCGC TCCGACCGCG CGCAGCAGTT CCTCTCGAAG
ATCCTGCAGC ACTGA
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| Protein sequence | MIDINQVSKW YGAFQVLTDC TTRIRKGEVV VVCGPSGSGK STLIKCVNAL EPFQQGSITV
DGASVGDPKI DLNRLRSRVG MVFQHFELFP HLSIEQNLSI AQVKVLKRSS SEARTRSMAL
LERVGMKAHS HKFPSQLSGG QQQRVAIARA LAMDPIAMLF DEPTSALDPE MVNEVLDVMV
QLACEGMTMM CVTHEMGFAR KVASRVIFMD RGSIVEDCPK EEFFGNPAAR SDRAQQFLSK
ILQH
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