| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5601 |
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| Symbol | |
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| ID | 7975213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 306324 |
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| End bp | 307778 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796185 |
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| Product | dihydropyrimidinase |
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| Protein accession | YP_002947459 |
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| Protein GI | 239820274 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
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| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type
[TIGR02033] D-hydantoinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCCCT ACGACCTGAT CCTTCGCAAC GCCGACATCG CCACCGTGGG CGACCGCTAC
CGCGCCGACA TCGGCGTTCG CGACGGACGC ATCAGCGCCA TCGCCCGGCA GCTCGACGGC
AGTGCTGCGC GCGAGATCGA TGCGGCCGGC CGGCTCGTCA CGCCCGGCGG TGTCGACGGC
CATTGCCACT TCGACCAGCC CACCGGGGAC GGCTCGCGTT TCTCCGATGA CTTCTTCACC
GGAACGCGCT CGGCGGCCTG CGGCGGCACC ACCACCGTGC TGCCTTTTGC CGCGCAGCAA
AAGGGCGGCA GCATCCAGGA CGCGGTCGAC GATTACCACC GCCGTGCCGA CGGCAAGGCG
GTGATCGACT ACGCCTTTCA CCTGATCGTC GCCGACGCCA CCCGGGACGT GACGCAGCGC
GAGCTGCCCG CGTTGATCGA GAAGGGCTAC ACCTCGTTCA AGATCTACAT GACCTACGAG
GACCTGAAGC TGGACGATCG CCAGATCATC GAGGTGCTTG CGGTGGCGCG CCGGCAGGGC
GCAATGACGA TGATCCACGC GGAGAACAGC GACTGCATCG CCTGGCTCAC CGAGCAGCTG
CTGGACGCGG GCCTCACCGC ACCGCGCTAC CACGCGAGTT CGCGGCCGAT GGCCGTGGAG
CGCGAAGCCA CGCACCGCGC GATCGCGCTG GCGGAACTGA TCGACACGCC GGTCCTCATC
GTGCATGTCT CGGGCCGCGA GGCCGTCGAG CAGATCCATT GGGCGCGCGG GCGCGGGCTG
CCGATCTTTG CAGAAACCTG CCCGCAGTAC CTGTTCCTGA GCGCGGAAGA CCTGGGCATC
GATCCCGACG ATCCCATGCA CGGTGCGCGC TGCATCTGCA GCCCGCCGCC GCGCGACAAG
GCCAACCAGC AGTTCATCTG GAACGCCCTG GCGAGCGGCC TCTTCACGGT CTTCTCATCG
GACCATGCGG CGTTCAACAT CGACGGCCCC GACGGCAAGC GCGTGGCCGG CGACGACGCT
TCCTTCGATC GCATTCCGAA CGGCATTCCC GGCGTCGAGA CGCGCATGCC GCTGCTGATG
AGCGAGGGCG TGCTGGCCGG GCGCATCGAC GTGCACCGCT TCGTCGAGCT CACGGCCACC
AACCCGGCGC GCATGTATGG CCTGTATCCG AAGAAGGGAA CGATCGCCGT GGGAGGCGAT
GCCGATTTCG TCGTCTGGGA TGTCTTCGAA GCGGGAAGCG AGAAGGTCAT CGCCAACGAC
ATGCTTCATC ACGCAGCCGA CTACACGCCC TACGAAGGCA TGCGGCTGCG GGCCTGGCCC
GCAGTCACGG TCTCGCGCGG GCGGGTGGTG TGGCAGGACG GCGTCTTTTC GGCCGAACCC
GGCTCGGGGC AGTTCCAGCC CTGCCTGCGT CCGCGCACGC CGAACGCCGG CAGTCCGCTG
GACAAATGGC TGTGA
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| Protein sequence | MQPYDLILRN ADIATVGDRY RADIGVRDGR ISAIARQLDG SAAREIDAAG RLVTPGGVDG
HCHFDQPTGD GSRFSDDFFT GTRSAACGGT TTVLPFAAQQ KGGSIQDAVD DYHRRADGKA
VIDYAFHLIV ADATRDVTQR ELPALIEKGY TSFKIYMTYE DLKLDDRQII EVLAVARRQG
AMTMIHAENS DCIAWLTEQL LDAGLTAPRY HASSRPMAVE REATHRAIAL AELIDTPVLI
VHVSGREAVE QIHWARGRGL PIFAETCPQY LFLSAEDLGI DPDDPMHGAR CICSPPPRDK
ANQQFIWNAL ASGLFTVFSS DHAAFNIDGP DGKRVAGDDA SFDRIPNGIP GVETRMPLLM
SEGVLAGRID VHRFVELTAT NPARMYGLYP KKGTIAVGGD ADFVVWDVFE AGSEKVIAND
MLHHAADYTP YEGMRLRAWP AVTVSRGRVV WQDGVFSAEP GSGQFQPCLR PRTPNAGSPL
DKWL
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