Gene Vapar_5599 details

Gene Information

• Locus tag: Vapar_5599
• ID: 7975211
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: +
• Start bp: 304842
• End bp: 305528
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644796183
• Product: putative demethylmenaquinone methyltransferase
• Protein accession: YP_002947457
• Protein GI: 239820272
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0684] Demethylmenaquinone methyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGGAAAG ACGATGACGG ACTGTTCGCC CTGATGCGCG CGCGCCTGTT CCCTGCGGTG 
GTCGGCGACA TCCTCGACAC CCTGGGTTTC ATGCACCAGT TCCTGCCCCC GGCCATCAAG 
CCGGTCGAAC GCTCCTTGGT CGTGGCGGGC CGCGCCATGC CCGTGCTGGA GACCCACTGC 
TTTGCGCGCT CCGAACCCGA GGGAAAGTCG CCGCTGAGCC GGCAGGCTTT CGGTCTGCTT 
TTCGAGGCGC TGGACGATCT CGCGCCGAAC GAGGTCTACG TGGCAACGGG GTCGGCCCCC 
GAGTTCGCGC TGTGGGGAGG TCTGATGACC ACGCGCGCCC TGCATCTGAA AGCAGCCGGC 
GCGGTTCTCG ACGGGTATTC CCGCGATACG GCGGAGGTGC TCGAACTCGG CCTCCCGGTG 
TTTTCGCTTG GCGGCTATGC CCAGGACCAG GGCCCGCGAG GCAAGGTCGT CGACTATCGC 
GTGCCGGTGG AGATCCGGGG AATTCGAGTT CGCCCCGGCG ACATCGTCTT CGGCGACCAG 
GACGGCGTGC TGATCATTCC GCGCGAGGCG GAGAAAGAGG CGATCAGCCT CGCGCTGGAG 
AAGGCCGACA CGGAAAGCAG CGTGAGAAAA GCCATCAAGA ACGGCATGAG CACGGTCGAG 
GCGTTCAAGA CCTTCGGGGT GATGTGA 

 

Protein sequence

MWKDDDGLFA LMRARLFPAV VGDILDTLGF MHQFLPPAIK PVERSLVVAG RAMPVLETHC 
FARSEPEGKS PLSRQAFGLL FEALDDLAPN EVYVATGSAP EFALWGGLMT TRALHLKAAG 
AVLDGYSRDT AEVLELGLPV FSLGGYAQDQ GPRGKVVDYR VPVEIRGIRV RPGDIVFGDQ 
DGVLIIPREA EKEAISLALE KADTESSVRK AIKNGMSTVE AFKTFGVM