| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5598 |
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| Symbol | |
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| ID | 7975210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 303978 |
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| End bp | 304748 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796182 |
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| Product | GntR domain protein |
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| Protein accession | YP_002947456 |
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| Protein GI | 239820271 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAC ACCCCTTCGT CCTGGGCCGA CTGGAGAGAA CTTCCCTTGC AGAGCAGGCC
GTTCAGAGCC TTCTGCAGCG CATACAGGAC GCGAAGCTCG GCCCGGGAGC ATCGCTGCCT
TCGGAAGCGC GCCTGGGTGA GTTGCTCGGC GTGAGCCGAA CCGTCGTGCG CGAGGCGCTG
AGAACCCTCA AGGGCTTGGG TGTGATCGAC ATTTCGAACG GCAAGAGCCC GACGATTCGC
CGCGAGCTGG ACGCGGCTGC GCTGGCCGTC TACTTTTCGC GCGCCGTGCA GGTCCTGGAC
AATTCCACGG AGGACTTGAT GGACGTGCGG GCAAGCCTCG AGGGCCGCGC TGCAGCATTG
GCAGCGCTTC GCCGCACGCC GGAGCAACTG GCCCGGATGT CTGATTTGGT GATCCGGATG
CAGGCGCAGC TTCGCCGCCC CGCGGTGTAC GCGTCGCTCG ATATGGAACT GCACCTGGAA
ATCTCGCGGG CGAGCGGAAA CCTGCTGCTG TTCCAGATCA TCGGATCGAT CCGGGCCTCG
CTGGAAGCGC AGTCGCGCCA GGGCATGGAA CGGCGCAAGA CGAAAGCAAG CCTGCAACAG
GTGCAGGATG CCCACGTCGA ACTCGTCGAG CGGATCGGCA ACCGGGATGC AGAGGGTGCG
AGCCGATGCA TGCTCTCGCA CATGGAGAGC GCGCTGAGGG TGCTCCCGGT CCAGGGCAGA
CCGGCCGTCA GCCGCCCGCG CGCTCGTCCG GAAGCTTCGC GATCACCTTG A
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| Protein sequence | MTAHPFVLGR LERTSLAEQA VQSLLQRIQD AKLGPGASLP SEARLGELLG VSRTVVREAL
RTLKGLGVID ISNGKSPTIR RELDAAALAV YFSRAVQVLD NSTEDLMDVR ASLEGRAAAL
AALRRTPEQL ARMSDLVIRM QAQLRRPAVY ASLDMELHLE ISRASGNLLL FQIIGSIRAS
LEAQSRQGME RRKTKASLQQ VQDAHVELVE RIGNRDAEGA SRCMLSHMES ALRVLPVQGR
PAVSRPRARP EASRSP
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