| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5597 |
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| Symbol | |
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| ID | 7975209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 303614 |
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| End bp | 304021 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644796181 |
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| Product | Endoribonuclease L-PSP |
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| Protein accession | YP_002947455 |
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| Protein GI | 239820270 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCAC GCAACGTTGT TTTTCCCGCC GGCCGCCAGG CGCTCTATGC GCGCAACCGG
TATTCGCCAG CCATCCGCTC CAACGGCTTT CTGTTCGTGT CGGGGCAGGT CGGCAGCCGG
CCCGATGGCT CGCCGGAGCC CGACCTGGAG GCGCAGGTCC GGCTCGCGTT CGACAACCTC
AACGCGATCC TCTCGGCCGC GGGCTGCAGC TTCGACGACG TGGTCGACGT AACGGTCTTC
ATCGTCGACC CTGAATCGAA GTTCGAAACC ATCTGGAAGG TGGTTGGGGA ATATTGGGGC
GAGGCGCCGC ACCCGACGCT GACGGGCATC GGCGTGACCT GGCTCTATGG CTTCCAGTTC
GAGATCAAGG TGATCGCGAA GCTTCCGGAC GAGCGCGCGG GCGGCTGA
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| Protein sequence | MSARNVVFPA GRQALYARNR YSPAIRSNGF LFVSGQVGSR PDGSPEPDLE AQVRLAFDNL
NAILSAAGCS FDDVVDVTVF IVDPESKFET IWKVVGEYWG EAPHPTLTGI GVTWLYGFQF
EIKVIAKLPD ERAGG
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