| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5592 |
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| Symbol | |
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| ID | 7975204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 300173 |
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| End bp | 300973 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796176 |
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| Product | ABC transporter related |
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| Protein accession | YP_002947450 |
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| Protein GI | 239820265 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.833771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAC CCACCGTGAT CGAGATCGCA GGCCTTCGAA AGTCCTTCGG CGCCCACGTG
GTCCTCAAGG ACATCTCGCT GAAGATCGAA CGCGGCCAGG TGGTCGCAAT GATCGGGCCT
TCGGGTTCCG GCAAATCCAC ACTGCTTCGC TGCATCAACC TGCTGACGGT TCCAGACGGC
GGACGCATCG CCGTCGGCGA CCAGGCGATC CAGTTCAGCG GACGCGACAC CGCGCTGCCG
AACGAGCGCA AGCTCGCCAA GTTCCGCGCC TCCACCGGCA TGGTGTTCCA GCACTTCAAC
CTGTTCCCCC ACATGACCGC GCTGCAGAAC GTCATGGAAG GCCCGGTCAC CGTGCTCAAG
ACGCCCAAGG CCCAGGCAGC GGCCGAGGCC CGGGCGCTGC TGCAGAAGGT GGGGCTGCTC
GAGCGCGCCG ACTACTACCC CGACAAGCTC TCGGGCGGGC AGAAGCAGCG CGTGGCCATC
GCCCGCGCGC TGGCCATGAA GCCGAACGTG ATGCTGTTCG ACGAGGCCAC CTCGGCGCTG
GATCCCGAGC TCGTCGGAGA AGTGCTGACC GTCATCAAGA GCCTGGCGAA GGAAGGCATG
ACCATGATCC TGGTCACCCA TGAAATCGGC TTTGCGCGCG AGGTGGCGGA CCAGGTGATC
TTCATGCGCG ATGGCGTCGT CGCGGAATGC GGGCCGCCCG GCATCGTCAT CGACAACCCG
CAGCAGGAGT CGACGCGCGC GTTCCTCGGC CGCTTCAAGG CGTCCGCCGG CACGGCCGAA
CCCGCTGCTG TCCTCGCCTA G
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| Protein sequence | MTTPTVIEIA GLRKSFGAHV VLKDISLKIE RGQVVAMIGP SGSGKSTLLR CINLLTVPDG
GRIAVGDQAI QFSGRDTALP NERKLAKFRA STGMVFQHFN LFPHMTALQN VMEGPVTVLK
TPKAQAAAEA RALLQKVGLL ERADYYPDKL SGGQKQRVAI ARALAMKPNV MLFDEATSAL
DPELVGEVLT VIKSLAKEGM TMILVTHEIG FAREVADQVI FMRDGVVAEC GPPGIVIDNP
QQESTRAFLG RFKASAGTAE PAAVLA
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