| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5586 |
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| Symbol | |
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| ID | 7975198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 292912 |
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| End bp | 293841 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644796170 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_002947444 |
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| Protein GI | 239820259 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.068315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCACCA TCGTGGTGAC CGGCGCCGAC CTGGCGCCGC AGGCCATCGC GCTGCTCGAG
GGCCACGAGA TCGTCTACGC CGGCAAGACG CCGACCGAAG ACGACCTGGT GGCGCTGTGC
CGCGCGCACG ACCCCGTGGC CATCATCGTG CGCTACGGCA AGGTCGGCGC CGCGGTGATG
GATGCGGCGC CCTCGCTGCG CGTGATCTCC AAGCACGGCA GCGGCACCGA CACCATCGAC
AAGGCCGCGG CCCGGGCGCG CGGCATCGAG GTCGTCGCGG CGGCCGGTGC GAATGCCGCT
GCGGTGGCCG AGCAGGCACT GGCCCTGCTG CTGGCCTGCG CCAAGTCGGT CGTGGCGCTG
GACGCGCGCA TGCACGCCGG CCACTGGGAC AAGGCCACGC ACAAGAGCCT CGAGCTCGGC
GGCCGCACCA TCGGGCTGAT CGGCCTGGGT GCGATCGGAC TGCGCTTTGC CCGCATGGCC
GATGCGCTGG GCATGCGCGT GATCGGCTTC GATCCCTATG CCGCGAATCT TCCGCCCCAT
GTGACGCCGG TCGACCTGCC GGCGATCTGG CGCGAGTCGG ATGCGATCTC GCTGCACTGC
CCGCTGACGG AAGACAACCG CGGCATGGTC AACGCCGGCA CGCTGGCGCG GTGCAAGCGC
GGCGTGATCC TGGTGAACAC CGCGCGCGGC GGCCTCGTCG ACGAGGCGGC GCTGCTGGCC
GCGGTGCGCT CGGGCCAGGT CGGCATGGCG GGCCTGGACA GCTTCGCGGT CGAGCCCATG
GCCGCCGGCC ACCCGTTCCA GGGCGAGGAG AACTTCGTGC TGAGCCCGCA CATCGGCGGC
GTGACCGGCG ATGCCTATGT GAACATGGGC GTCGGCGCGG CGAAGAACGT GCTGCAGGTG
CTCGCACGGC AGCCGGTCGC CACGGCCTGA
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| Protein sequence | MSTIVVTGAD LAPQAIALLE GHEIVYAGKT PTEDDLVALC RAHDPVAIIV RYGKVGAAVM
DAAPSLRVIS KHGSGTDTID KAAARARGIE VVAAAGANAA AVAEQALALL LACAKSVVAL
DARMHAGHWD KATHKSLELG GRTIGLIGLG AIGLRFARMA DALGMRVIGF DPYAANLPPH
VTPVDLPAIW RESDAISLHC PLTEDNRGMV NAGTLARCKR GVILVNTARG GLVDEAALLA
AVRSGQVGMA GLDSFAVEPM AAGHPFQGEE NFVLSPHIGG VTGDAYVNMG VGAAKNVLQV
LARQPVATA
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