Gene Vapar_5585 details

Gene Information

• Locus tag: Vapar_5585
• ID: 7975197
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: +
• Start bp: 292226
• End bp: 292915
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644796169
• Product: Dimethylmenaquinone methyltransferase
• Protein accession: YP_002947443
• Protein GI: 239820258
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0684] Demethylmenaquinone methyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0246654
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCTCCA ACCCTCCCGA CATCATCCGC AATTTCGAGC GCGTGCCCGC GCACGTCGTG 
GCGCAGGCCG CCGAACTGCA GCCCGCCATC CTGGCCGACG TGGCCGGCCG CCGAGGCGCG 
ATGCATGGCC GCATCAAGGC GCTGCGCCCA CGCATGAAGC TGGCCGGCCC CGCCTTCACG 
GTGGAAGTGC GGCCCGGCGA CAACCTCATG ATCCACGCCG CCATCGCAAT GGCCAGGCCC 
GGCGACGTGC TGGTGATCGA CGGCAAGGGC GACCAAGGCT CGGCGCTCAT GGGCACCATC 
ATGATGACGG CCTGCCAGAA GCTCGGCATC GCGGGCGTGG TGATGGACGG CGCCTGCCGC 
GACAGCCTCG AGATCGACGA GATGGACTAC CCCGTGTTCT GCGTGGGCAC CAACCCGAAC 
GGCCCGACCA AGAACATCGC CGGGCGCATC GGCCATCCCG TCTCGGTCGG CGACGTCACG 
GTGCGCGCGG GCGACTTCGT GATTGCCGAC GGCGACGGCG TGGTGGTGGT CGAGCGCGAG 
AAGATCGAGG CGCTGCTGCC CGCGGCGGCC CGCAAGGTCA GCGACGAGGC CGCACGCATT 
GCCGCCATCA AGGAAGGCGA CACCGCGGCC AAGTGGCTGA ACAGCGCACT GCGCACGGCC 
GGCGTGCTCA AGGAAGGAGA GACCCTGTGA 

 

Protein sequence

MSSNPPDIIR NFERVPAHVV AQAAELQPAI LADVAGRRGA MHGRIKALRP RMKLAGPAFT 
VEVRPGDNLM IHAAIAMARP GDVLVIDGKG DQGSALMGTI MMTACQKLGI AGVVMDGACR 
DSLEIDEMDY PVFCVGTNPN GPTKNIAGRI GHPVSVGDVT VRAGDFVIAD GDGVVVVERE 
KIEALLPAAA RKVSDEAARI AAIKEGDTAA KWLNSALRTA GVLKEGETL