Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5584 |
Symbol | |
ID | 7975196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 291164 |
End bp | 292177 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644796168 |
Product | hypothetical protein |
Protein accession | YP_002947442 |
Protein GI | 239820257 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0384253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCTCAT TCCCGCTTCG TGCCGGCGCT TCGCGTCGTC GTCTCGCCAT CGCCGCCGCA GCACTGGTGG CCGGCGCCAC CCTCCTCGCA CCTGCCGGCG CTCTTGCGCA GGCCCCGTAT CCGTCGCGGC CGATCCGGCT GATCGTGCCG TTCCCGGCCG GCGGCGGCAC CGACCTGATT GCGCGTGAAG TTGCCAACAA GGTCGCCACC AGCAACGGCT GGTCGATCGT CATCGACAAC AAGCCCGGCT CGGGCGGCAA CCTCGGGGTC GATGCGGCCG CCAAGGCAGC GCCCGACGGC TACACGCTGG TGCTCGGCCA GACCAGCAAC CTGGCGATCA ATCCCACGCT CTACGCCAGG CTGCCCTACA ACCCCGAGAA GGATCTGACG CCGATCGGCC TCGTGGCCAG CGCGCCGCTG GTGCTGGTGG TGGCGGCCGA CTCGCCGTAC AAGACATTGG CCGACGTGGT GGCCGCGGCC AAGGCCAGGC CCGATGCGCT CAACTACGCG AGCTCGGGCA GCGGCACGGT GGCGCACCTG GCGACCGAGC TCTTCCAGAA GACCGCCGAC GTCAGGTTCA CGCACGTGCC CTACAAGGGC GCCGCGCAGG GATCGACCGA CCTGATCGGC GGCCAGGTCC AGATGTACAT GTCCTCGGTG CCGACGCTGA TCGGGCACAT CAAGAGCGGC AAGATGCGCC CGATCGTCGT CACCTCGCGC AAGCGCACCG CCGACCTTCC CGGTGCGCCA ACGGTGGACG AGTCGGGCTA CAAGGGCTTC GAGGCCGCGA CATGGTTCGG CGTTGCGGGT CCGGCCGGCC TGCCGAAGGA CGTGGTGGCC AAGCTCAACG CGGCGTTCAA CAAGGCGCTG CAGGACCCCG AGGTCAAGCG CAAGCTCGCA AGCCAGGGCG CCGAGGTGAA GGGCAGCACG CCGGAGGAGT TCGGCGCCTA CATCCGCGAA GAAATGGTGC GCTGGGGCAA GGTCGTCAAG GACTCGGGCG CCAAGGTCGA TTGA
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Protein sequence | MPSFPLRAGA SRRRLAIAAA ALVAGATLLA PAGALAQAPY PSRPIRLIVP FPAGGGTDLI AREVANKVAT SNGWSIVIDN KPGSGGNLGV DAAAKAAPDG YTLVLGQTSN LAINPTLYAR LPYNPEKDLT PIGLVASAPL VLVVAADSPY KTLADVVAAA KARPDALNYA SSGSGTVAHL ATELFQKTAD VRFTHVPYKG AAQGSTDLIG GQVQMYMSSV PTLIGHIKSG KMRPIVVTSR KRTADLPGAP TVDESGYKGF EAATWFGVAG PAGLPKDVVA KLNAAFNKAL QDPEVKRKLA SQGAEVKGST PEEFGAYIRE EMVRWGKVVK DSGAKVD
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