Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5582 |
Symbol | |
ID | 7975194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 289117 |
End bp | 289764 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644796166 |
Product | hypothetical protein |
Protein accession | YP_002947440 |
Protein GI | 239820255 |
COG category | [S] Function unknown |
COG ID | [COG4185] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0238097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCGG CCGCCCGCCC CTTCATCCTG GTGCTGGCCG GTGTCAACGG CGCGGGCAAG AGCTCGGTCG GTGGTGCCCT GCTCGCCGAG CACGGCTTGA CCTGGTTCAA CCCCGACACC TGCGCGCGCG AGCTCATCGC GCAGCTCGGG ATCACGCCCG AAGAGGCGAA CGCCCGCGCA TGGAATCTGG GCCGCGAGCG GCTGGAAGCG GCCATCGCGC AGCGTTCCAA CTACGCCTTC GAGACCACGC TGGGCGCGAG CACCATTCCC GCGCTGCTCG CGCGCGCCGC GTCGAGCCAC GACGTGGTCA TGATCTTCTG CGGGCTGTCT TCGCCCGAGC AGCACATCGC CCGCGTGCGG GCGCGCGTGA CGCGCGGCGG CCACGACATT CCAGAGGCCA AGATCCGCGA GCGCTGGATC GCCTCGCGCG CCAACCTCAT CAAGCTGCTG CCCAAGCTCA CGCGGCTGCA GGTCTTCGAC AACAGCGCGG AGGCGCCGCC CGGCGGCGAC ATTGCGGACC CGGTGCTGGT GCTCGAACTG AGCGCGGGCG AACCCGTCTT TCCGCAGCCG GGCGACCTGG CCGCGCTCGC GGCCACGCCG GCCTGGGCGC GGCCGATCGT GCAGGCGGCG ATCGAGCTGC TGGGCTGA
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Protein sequence | MAAAARPFIL VLAGVNGAGK SSVGGALLAE HGLTWFNPDT CARELIAQLG ITPEEANARA WNLGRERLEA AIAQRSNYAF ETTLGASTIP ALLARAASSH DVVMIFCGLS SPEQHIARVR ARVTRGGHDI PEAKIRERWI ASRANLIKLL PKLTRLQVFD NSAEAPPGGD IADPVLVLEL SAGEPVFPQP GDLAALAATP AWARPIVQAA IELLG
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