| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5575 |
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| Symbol | |
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| ID | 7975187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 282731 |
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| End bp | 283495 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796159 |
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| Product | transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_002947433 |
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| Protein GI | 239820248 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00404309 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAACC CGTCCCTGAC CCAAGCCGCC GCACGCGCAG CAGTGCCGAA GGCCGGCATC
GCGGTCCACG AGCGGGCCAG CCGGAAGCTG GTGGAGACGC AGCAGCTGCT GAAGGAGTGC
CTGGCTCCGC AGCGCCGCGT GGTGCATGCC GGCGACGTGA TCTACCGGGC CGGCGAGCAG
TTCGGCAATC TCTACATCCT GAACTCGGGC TTCTTCAAGA TCGTGAACCT CTCCGCGGAC
GGGCGCGAAC AGGTGGTGGG GCTGAAGTTC CGCGGCGACT GGCTCGGCTT CGACGGCATC
GCCTCCAACC ACTATTCCTG CGACGCCGTG GCCATGGACA CGGGCGAGGT CTGGGTCGTT
TCCTACGAGG CGCTGCTGGC CGCATCGCTT GCGGAGCCTG CCTTGCTGCA GGTGTTCCAC
ACCGCGATGA GCCGCGAGAT CGCCCATGAC CGCGATTCGC TGATGTCGGT GTGCACGCTG
CCGGCCGATG CGCGGGTGGC CGACTTCCTG CGCTACTGGG CCGAATCGCT GGCCGAGCGC
GGCATGCGCA CCGACCAGAT CACGCTGCGC ATGACGCGTG CCGAAATCGG CAACTACCTG
GGCATGACGC TCGAGAGCGT GAGCCGGGCG CTGTCGAGGC TGGCGCGCGA CAAGGTGATC
GAGTTCGTGG AAAAGGGCCG CCGCGACGTG CAGATTCCCG ACGTGGGTGC CCTGTCGGCC
TTTGTGCAGC GCTGCCTCGC ACCGGCGCCT GCGATGCTGC AGTAA
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| Protein sequence | MFNPSLTQAA ARAAVPKAGI AVHERASRKL VETQQLLKEC LAPQRRVVHA GDVIYRAGEQ
FGNLYILNSG FFKIVNLSAD GREQVVGLKF RGDWLGFDGI ASNHYSCDAV AMDTGEVWVV
SYEALLAASL AEPALLQVFH TAMSREIAHD RDSLMSVCTL PADARVADFL RYWAESLAER
GMRTDQITLR MTRAEIGNYL GMTLESVSRA LSRLARDKVI EFVEKGRRDV QIPDVGALSA
FVQRCLAPAP AMLQ
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