| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5574 |
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| Symbol | |
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| ID | 7975186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 281801 |
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| End bp | 282682 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796158 |
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| Product | YdjC family protein |
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| Protein accession | YP_002947432 |
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| Protein GI | 239820247 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3394] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0120442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAGG CCAGCGGAAT ACAGCCGATT CCGGCTTCGC GCCATCTCTG CATCTGCGCG
GACGATTTCG GCATGAGCGC GGGCATCAAC TCGGCCGTCT TCGATCTGGC CGAGCGGGGC
GCCATCTCCG CCACCAGCGG CATGGTGCGC CGCAGCGCCT GGAAGGGCGG TGCGTGCGCG
CTGAGACACT TCGATACGAG CCGGCTGGAC GTGGGCCTGC ACCTGGACCT CACGCGGCCG
GCCATCGCCG ACGGCGCCGA ACCCGGGCTG GCGGGCCTGA TCGCGAGGAC CTGCATGCGC
ACCGTCGATG CCCAGGCGCT GCGCGCCGAC ATCCGCGACC AGCTGGACCG CTTCGAGGAT
GCGATGGGAT ACGCGCCCGC CTTCGTCGAC GGGCACCGGC ACGTGCACCA GCTGCCGGTG
GTGCGCGAAC TGCTGGTCGA GGAAATCGTG CGGCGCTACC CCATGCCGCG GCCGTGGCTG
CGCTGCACCG CCGCGGCGGC CCCGGGCGCT GCCGCCGGCG GCATCAAGGC CGGCATCATC
CATGCGCTGG GCGGCGCCAG CCTGCGCGCG CTCGCGCGGC AGCACGGCAT TCCGGTGAGC
CGCGGCCTGG TCGGTGTCTA CGATTTTTCG GGCAGTGCGG CCGACTACCG GCAGCGCCTG
TCCGCCTGGA TCGCCGCCAG CCGCAGCGGC GACGTGCTGA TGTGCCACCC GTCCGCCGGC
CTCTTGCCGA GCGACCCGCA CGGCGCCGCG CGGCTGCGCG AATACGCCGT CCTGCGGGAG
CTGGAGTTCC CGGTGTCCAC GCGCTTTGGC GAGGTCGACA TTGCACCGCT GTCGCACATG
CTCCGAATGG ACGAGTCCGC TTTTGTCCAG GCCGCCGAAT AA
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| Protein sequence | MTEASGIQPI PASRHLCICA DDFGMSAGIN SAVFDLAERG AISATSGMVR RSAWKGGACA
LRHFDTSRLD VGLHLDLTRP AIADGAEPGL AGLIARTCMR TVDAQALRAD IRDQLDRFED
AMGYAPAFVD GHRHVHQLPV VRELLVEEIV RRYPMPRPWL RCTAAAAPGA AAGGIKAGII
HALGGASLRA LARQHGIPVS RGLVGVYDFS GSAADYRQRL SAWIAASRSG DVLMCHPSAG
LLPSDPHGAA RLREYAVLRE LEFPVSTRFG EVDIAPLSHM LRMDESAFVQ AAE
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