| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5568 |
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| Symbol | |
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| ID | 7975425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 277068 |
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| End bp | 277502 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644796152 |
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| Product | protein of unknown function DUF395 YeeE/YedE |
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| Protein accession | YP_002947426 |
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| Protein GI | 239820241 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2391] Predicted transporter component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.127234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGATCG ACTGGCCTGC ATTCACTCCA TGGACCGCCC TGGCGGGCGG CGTGCTCGTT
GGCGCGGCCG CCGCGATGTT CGTGCTGCTC AACGGCCGCA TCGCCGGCAT CAGCGGCATC
GTCGGCGGGC TGCTGCGGCC CGTGCGGGGC GACGTGGCCT GGCGCCTGGC GTTCGTGGCC
GGGCTGGTCG CGGCGCCCAT GGCCTATGCG GCTTTCGCGC CGTGGCCCCG GCCGCAGATC
GATGCCGGCT ACGTTGCGCT CGTTGCGGCC GGCCTGCTGG TCGGCGTGGG CACGCGCTAC
GCGTCGGGGT GCACGAGCGG CCACGGCGTG TGCGGCCTCT CGCGGCTGTC GCCGCGCTCG
CTGGCGGCGA CCGCGGTCTT CATGGGTGCC GGCTTCCTGG CCGTGTTCCT GATGCGCCAT
CTGCTCGGTC TTTGA
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| Protein sequence | MTIDWPAFTP WTALAGGVLV GAAAAMFVLL NGRIAGISGI VGGLLRPVRG DVAWRLAFVA
GLVAAPMAYA AFAPWPRPQI DAGYVALVAA GLLVGVGTRY ASGCTSGHGV CGLSRLSPRS
LAATAVFMGA GFLAVFLMRH LLGL
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