| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5550 |
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| Symbol | |
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| ID | 7975407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 254593 |
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| End bp | 255120 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796135 |
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| Product | transcriptional regulator, MarR family |
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| Protein accession | YP_002947409 |
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| Protein GI | 239820224 |
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| COG category | [K] Transcription |
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| COG ID | [COG1846] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.347525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAATAA AAACCAAAGC CGTCGACGCG AAGTGCAGCC TGGACAAGCC GGCCGCGGAT
CAGGATGTCC TGGGTGGGCG CGTCTGCACG AACACGGCGC TGCGCCTGGC CGCCCGCCGG
CTGGGCCAGC TGTACGACGA AGCACTGGCA CCGCTGGACC TCAAGGCCAC GCAGCTCGCG
CTCATCGCGG AAATCGACAA GCTCACGGTT GCCGCCCCGC AAGGGCCGAC GCTGCAGGAC
CTCGCGACCC GGCTCGCCAT CCAGCTGTCG GCGCTGACCC ACGCGCTCAG GCCGCTGGTG
CGCGACGGCT TCGTCGAGTT GCGTGCGGAC GCCAAGGACC GGCGCACCAA GCACGGCGTG
CTCACCCCGC TGGGCAAGGC CAAGTTGTCC GAAGCGGTGT GGCGCTGGGC CGCGGCAAAC
GACCGCGTGG AGGCCGTGCT GGGCCCTGCC TCGGCGGCGA ACCTCCGGGC TCTGGCCGAT
CAGGTGTCGT CCGACGCGTT CCTGGCGGCA TACAGGTCGG AGGATTGA
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| Protein sequence | MGIKTKAVDA KCSLDKPAAD QDVLGGRVCT NTALRLAARR LGQLYDEALA PLDLKATQLA
LIAEIDKLTV AAPQGPTLQD LATRLAIQLS ALTHALRPLV RDGFVELRAD AKDRRTKHGV
LTPLGKAKLS EAVWRWAAAN DRVEAVLGPA SAANLRALAD QVSSDAFLAA YRSED
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