Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5547 |
Symbol | |
ID | 7975404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 250769 |
End bp | 251746 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644796132 |
Product | hypothetical protein |
Protein accession | YP_002947406 |
Protein GI | 239820221 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAC TGCTGCGGGC TTCGGCCCTG GCGGCACTGG GCGCCTGCGC GCTCGTGCAG GCCCATGCGC AAGGCCCCGC CGACTTTCCG ACACGCCCGA TCCGGATCGT GGTGCCCTTT GCCGCCGGCG GCGCCACCGA CGTGATCGCC CGCGTGGTGG GACAGAAGAT GTCGGACCAG CTCGGCCAGC CCGTGGTGGT CGACAACAAG GCCGGGGCCA ACGGGAACAT CGGCGCCGTG GCCGTGGCCC GCGCTGCGCC CGACGGCTAC ACGATCCTGA TGGCGACCTC GAGCCACGCG ATCAACGCGA CGCTCTACCG CAAGCTCGAC TACAGCCTGA CCAAGGACTT TGCGGCGCTG TCGAACCTGG CCTCGGTGCC GCTGGTGCTG GTGGTGAACC CGGGCGTGCC GGCACGCAGC GCGGCCGAGT TCGCGGCCTA CGCGAAAAGG CAGGGCGACA GGCTCAACTT CGCTTCGGGC GGCACCGGCA CCGCGGCGCA CCTGGCGGGC GAGCAGTTCA ACACCCTGGT GGGCACGCGC ATGCTGCATG TGCCCTACAA GGGCGGCGCG CTGGCCCAGA CCGACCTCAT CGGCGGCCAG GTGCAGGCGA TGTTCGCCAA CCTGCCCGAG GTGCTGTCGC AGGTGCAGGC CGGCAAGCTG CGGCCGCTGG CGCTGACCGG CAAGGCCCGC CGCGCCAGCC TGCCCGAGGT GCCGACCTTC GCCGAAGCCG GCTATCCGCA GATGGAGGCG CGCTCGTGGT TCGGCCTCTT CGCGCCGGCC GGCACCCCGG CGCCGGTGGT GGCCCGGCTG TCTTCGTCGA TCGCGCAGGC GGTGGCCGAC CCGGCCGTGC AGGCGCGCCT CAAGGAACTC GGCGCCGACG CCATCGGCGA CACGCACGAA GCCTTCCAGC CCTTCGTCGC ACAGGAAGTG AAGCGCTGGG GCGCACTGGT CGAGCGTTCC GGCGCGACCG TGGACTGA
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Protein sequence | MNKLLRASAL AALGACALVQ AHAQGPADFP TRPIRIVVPF AAGGATDVIA RVVGQKMSDQ LGQPVVVDNK AGANGNIGAV AVARAAPDGY TILMATSSHA INATLYRKLD YSLTKDFAAL SNLASVPLVL VVNPGVPARS AAEFAAYAKR QGDRLNFASG GTGTAAHLAG EQFNTLVGTR MLHVPYKGGA LAQTDLIGGQ VQAMFANLPE VLSQVQAGKL RPLALTGKAR RASLPEVPTF AEAGYPQMEA RSWFGLFAPA GTPAPVVARL SSSIAQAVAD PAVQARLKEL GADAIGDTHE AFQPFVAQEV KRWGALVERS GATVD
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