| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5533 |
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| Symbol | |
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| ID | 7975390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 236368 |
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| End bp | 237294 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796118 |
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| Product | Aldose 1-epimerase |
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| Protein accession | YP_002947392 |
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| Protein GI | 239820207 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2017] Galactose mutarotase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCTGA ACGTGACGCC CGACACCACG CTGTGCAGCG GAACGCTGAC GGCGACGCTG
GCGCCGGCTG CCGGCGGACG CGTCACCAGC CTCAGCTCCC GCGCAACCGC GGGCGAACGA
ATCGACTGGC TGGTGCCGCT CGACGACGCC GTCCGCGCCG GCGGTTTCGA ATCCACCCAG
TGGCCCAAGG CCGGCTGCTA TCCCCTGGTT CCGTTTTCGA ACCGCATCCG CGATGGCCGC
GTCGCCGGCA CGCAGGGCAG GGTGCAGTTG CCGCTTCATC CGGGGGAACG GCACGCGCTG
CATGGCGTCA GCCAGCAGCG TCCATGGCAC CTCGAGCGGC ACGCGGCGGA CCGCGCAACC
ATGACCTATG TCCATGTGCC GGGGGACCAC CGCTGGCCAT GGGCTTTTCG GGCCGAGCAG
GTGGTGGAGC TCGATGCCGC GGGCATCACG CTGAGCTTGC GGGTCACCAA CGACGACCGG
GAGCCGATGC CGGGCGGTTG CGGCTTCCAT CCCTATTTCC CGGCCCAGTT CGCGCACGGC
CTGCAGTTCG ATGCGCGCAC CGTCTGGCCG GCGGACGCCG AATTCCTCGC GAGCACGCCG
CAGCCGACCG GTCCGGCGGA CGACTACGCG TCGGCGAAGG CCTTGCCCGA TGTCGAATGC
ACCCGCTACT ACGGCGAATG GAACGGACAA GCGCGAATGG CGGCGGCCGA TGGTCCCGCC
ATCGAACTGC TGGCCAGCGC CGCGCTGCAG CACCTGGTGC TGCATCGGCC GGGTCCGGGA
GCGTACTTCT GCGTGGAACC GGTCTCGCAT GTCGCGGACG CCGCCAACCT GGCTGCGGCG
CGCGCCGACA CCGGCTGGCG GGTGCTCGCG CCCGGCGAGG CGATGACATG CAGCCTGCGC
CTGTCGGTCT TTCCTCTGTC GAGCTAA
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| Protein sequence | MHLNVTPDTT LCSGTLTATL APAAGGRVTS LSSRATAGER IDWLVPLDDA VRAGGFESTQ
WPKAGCYPLV PFSNRIRDGR VAGTQGRVQL PLHPGERHAL HGVSQQRPWH LERHAADRAT
MTYVHVPGDH RWPWAFRAEQ VVELDAAGIT LSLRVTNDDR EPMPGGCGFH PYFPAQFAHG
LQFDARTVWP ADAEFLASTP QPTGPADDYA SAKALPDVEC TRYYGEWNGQ ARMAAADGPA
IELLASAALQ HLVLHRPGPG AYFCVEPVSH VADAANLAAA RADTGWRVLA PGEAMTCSLR
LSVFPLSS
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