Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5531 |
Symbol | |
ID | 7975388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 234461 |
End bp | 235426 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644796116 |
Product | hypothetical protein |
Protein accession | YP_002947390 |
Protein GI | 239820205 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACGCC GCTTCTTCGC CGCCCTCGTG TTCGGCCTCA TCGCTGCTGC GAACTGGCCT GTCGCCGCAC AGACCTATCC AGCCCACCCG GTGAAGCTGG TCATCCCGGT TCCGCCCGGC GGCAGCGCGG ACGTGGTCGG GCGCCTGCTT GCCAATGCGG CGTCGGCGGA GCTGGGCCAG CCCGTCATCG TCGACAACCG TGCCGGAGCC GCCGGCAGCG TGGGAACGGC GTCGGCGCTG AAGGCGCCGG CCGACGGCTA CACGCTGGTC CAGTGCAGCA TCGGCAGCTG CGCCATCAAT CCGAGCCTGT ACAAGAACGT CGGCTACGAC CTGTTCAAGG ACATGGCCCC GGTGATCCTG CTGGGCGCAT CGATCAATGT GCTCACCGTC AACAACGAGG CGGGCATCCG CAGCGTGAAG GACCTGGTCG ACCAGGCCAG GCGCCAGCCC ATGGCCTACG CGTCTTCGGG CGTGGGCGCG TCCAACCACC TCGCCGCCGA GTTGCTCAAG AAGATGGCGG GCGTCGAGCT GACGCATGTG CCGTACAAGG GATCGGGGCC TGCCATCACC GACCTCATCG GCGGCCAGGT CCCGGTGTTC TTCGACAACG AGCCTTCCAT CCTGCCCTTC ATCAAGCAGG GCAAGGTGCG TGCGCTGGCG GTGACGGGCA AGACGCGCTC GGCCAATCTG CCGGACGTCC CGACGATGGA AGAACTGGGT TTTGCCGGCT TCGTCATCGA GCCGTGGTAC GCCTTCGCGG CCCCGGCGGG CACGCCCGAG CCGGCGATCC GGCGGCTCAA TACCGCGTTC AACAACGCGC TGAATCAACC GGCGGTGCGC GACAGGATGG TCGCCATGGG CATTACCCCG GCGGGCGGCT CGCCCGAAGT GCTCGGTCGC CTGATCCGCA GCGAATACAC ACGCTGGGCG GAGTTGATCC GCGTGCAAGG TATCAAGGGA GATTGA
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Protein sequence | MERRFFAALV FGLIAAANWP VAAQTYPAHP VKLVIPVPPG GSADVVGRLL ANAASAELGQ PVIVDNRAGA AGSVGTASAL KAPADGYTLV QCSIGSCAIN PSLYKNVGYD LFKDMAPVIL LGASINVLTV NNEAGIRSVK DLVDQARRQP MAYASSGVGA SNHLAAELLK KMAGVELTHV PYKGSGPAIT DLIGGQVPVF FDNEPSILPF IKQGKVRALA VTGKTRSANL PDVPTMEELG FAGFVIEPWY AFAAPAGTPE PAIRRLNTAF NNALNQPAVR DRMVAMGITP AGGSPEVLGR LIRSEYTRWA ELIRVQGIKG D
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