| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5524 |
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| Symbol | |
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| ID | 7975381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 225008 |
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| End bp | 226306 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796110 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947384 |
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| Protein GI | 239820199 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5368] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.86603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGAAGA AGGATGACAG GAACCCGAAG GCCTTGGCAG CCCTGCCCGA TGAAGCCTTG
CTCGACGCCG TGCAGCGGCA GACCTTCCGC TATTTCTGGG ACGGCGCGGA TGCCGCCAGC
GGCCTGGCGC TCGACCGCCG CACGCTCGTC GGCGCCACCG GCGAAGACCT GGCCGACGAG
AGGGTCGCGA TCGGCGGCAC GGGCTTCGGC ATCATGGCCC TGATCGTCGC GGTGGAGCGC
GGCTGGATCA CGCGGGACGC GGCGCTGGAG CGCCTGGGGC GCATGCGGGA CGCCCTCTTG
CGCGCCAGGC GCTACCACGG CGCCTTTCCG CACTTCATGG ACGGGGCGAG CGGCGCAACG
ATCCCGATGA GCCCCAAGGA CGACGCGGGC GACCTGGTCG AGACCTCGTT CCTCTGCATG
GGCCTGCTCT GCGCGCGCCA GTATTTCAGC GAGGACACGG CCATGGCGCG CCGACTGCGC
GCCGACATCG ACACGCTGTG GCACGAGGTC GAGTGGAACT GGTTCACCCA GGGCGGGCGC
GACGTGCTGT ATTGGCACTG GAGCCCGAAC CACGGCTGGG CCATGAACCA TGAGGTGCAC
GGCTGGAACG AGTGCCTCAT CACCTACTTC CTGGCGGCGG CCGCGCCGCG CCATGCGATC
GATCCGAAGG TCTACCACCG CGGCTTTGCC TCCGGTCCCG ACTTCCTCAA CGGCCATTCG
TACCACGGCA TCGAGCTGCC GCTGGGTCCG CCGAACGCCG GTCCGCTGTT CTTTGCGCAC
TACTCGTTCT GCGGCCTCGA TCCGCGCGGC CTGAGGGACC GCTACGCAGA CTACTGGGAT
CTCAACACGC GCCACGTGCG GATCAACCGC GCCCACTGCA TCGCCAACCC GCGGGGCTTC
CCGGGCTATG GCGAATCGTG CTGGGGCCTG ACCGCGAGCG ACGACCCCGA CGGTTACCTT
GCGCACGATC CCAACAACGA CAACGGCACC ATCTCGCCGA CGGCCGCGCT GGCCAGCCTG
CCCTATGCGC CCGCCGAGGT GATGCGGGTG CTGCGGCATT TCCTCACCGT GCATGGCGAG
CGGGTGTGGC GGGACTACGG CTTCGTCGAT GCGTTCTGCG AGCGGCGCGG CTGGTTCGCA
GACACCTACC TTGCCATCGA CCAGGGCCCG ATCGTCGTGA TGATGGAAAA CCATCGCACG
GGCCTTCTGT GGAAACTGTT CATGAGCGTG CCCGAAGTGC AGGCCGGGCT GCGCGCGCTG
GACTTCAGCA GCCCGCATCT CGAGGCGTCG GCGGCGTGA
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| Protein sequence | MLKKDDRNPK ALAALPDEAL LDAVQRQTFR YFWDGADAAS GLALDRRTLV GATGEDLADE
RVAIGGTGFG IMALIVAVER GWITRDAALE RLGRMRDALL RARRYHGAFP HFMDGASGAT
IPMSPKDDAG DLVETSFLCM GLLCARQYFS EDTAMARRLR ADIDTLWHEV EWNWFTQGGR
DVLYWHWSPN HGWAMNHEVH GWNECLITYF LAAAAPRHAI DPKVYHRGFA SGPDFLNGHS
YHGIELPLGP PNAGPLFFAH YSFCGLDPRG LRDRYADYWD LNTRHVRINR AHCIANPRGF
PGYGESCWGL TASDDPDGYL AHDPNNDNGT ISPTAALASL PYAPAEVMRV LRHFLTVHGE
RVWRDYGFVD AFCERRGWFA DTYLAIDQGP IVVMMENHRT GLLWKLFMSV PEVQAGLRAL
DFSSPHLEAS AA
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