| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5519 |
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| Symbol | |
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| ID | 7975376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 220392 |
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| End bp | 221537 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644796105 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_002947379 |
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| Protein GI | 239820194 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.152569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCGC TGCCCCTCTC CCCTGTCCAC GTCGCGCGCA TCGAGGCCTT CGTGTTCCGC
TGCCCGATCG CCACGCCCGT GCGCACCTCC TTCGGCACCA TGCATGACCG GCCGGCCGTC
TTCGTGCGCG TGGAAGACCG CGACGGCGCC ACCGGCTGGG GCGAGGTCTG GTGCAACTTT
CCTTCCTGCG GCGCGGAGCA CCGCGCGAAG CTCGTCGACA CCGTGATGGC GCCGCTGCTG
GCGAGCCGCG CCTTCGACGG CCCCGCCGAA GCCTTCGACT GGCTGACGCA GCGCACCGCC
GTGCTCGCGA TCCAGTCGGG CGAGCCGGGC CCCATGGCGC AGGTGATCGC GGGCATCGAC
CTGGCGCTGT GGGACCTGTG CGCACGGCGC GCCGGCCAGC CGCTGTGGCG CTACCTGGGC
GGCGCGCACG ACGGCGTGGG CGTCTATGCC AGCGGCATCA ATCCCGATCG GCCGCAGGAC
CTGGCGGCGG CGCGGCTCGC CGAAGGCTAC CGCGCGTTCA AGCTCAAGAT CGGCTTCGGC
CGCGAGCGCG ACCTGGCGAA CCTCGCCGCG ATGCGCGAGG TGCTGGGCCC CGGCCTGCCG
CTCATGACCG ACGCCAACCA GGCCTGGAGC CTCGACGAAG CCCGCGCCAT GGCGCCGCAG
CTGGAGGCCT TCAACCTCGG GTGGCTCGAA GAGCCGCTGC GCGCCGACCG GCCCTGGCAC
GAGTGGCAGC AGCTGTCGCA GGCCACGGGC ATTCCGCTCG CGGCCGGCGA GAACATCGCG
GGCCCGGCGG CCTTCGATGC CGCCATTGCG CAAGGCGTGC TCTCGGTGCT GCAGCCCGAC
AGCGCCAAGT GGGGCGGCAT CTCGGGCTGC AGGCCCGTCA TCGCACGCGG CCAGGCCGCG
GGCCTGCGCT ACTGTCCGCA CTACCTCGGC GGCGGCATCG GTCTGCTGCA TTCGGCCCAT
CTGCTGGCCG CGGCCGGCGG TGGCGGCATC CTCGAGATCG ACGCCAATCC CAACCCGCTG
CGCACCGCGC TCGCGCCGGC GCTGTCGCGC GTGACGGAAG GCCGCTGCAG CCTGGGCGAG
CAGCCGGGCA TCGGCGTGGC GCCCGACCTG AACGCGGTGG CGCAGCTGGC GGCGGCGGGC
TGCTGA
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| Protein sequence | MKPLPLSPVH VARIEAFVFR CPIATPVRTS FGTMHDRPAV FVRVEDRDGA TGWGEVWCNF
PSCGAEHRAK LVDTVMAPLL ASRAFDGPAE AFDWLTQRTA VLAIQSGEPG PMAQVIAGID
LALWDLCARR AGQPLWRYLG GAHDGVGVYA SGINPDRPQD LAAARLAEGY RAFKLKIGFG
RERDLANLAA MREVLGPGLP LMTDANQAWS LDEARAMAPQ LEAFNLGWLE EPLRADRPWH
EWQQLSQATG IPLAAGENIA GPAAFDAAIA QGVLSVLQPD SAKWGGISGC RPVIARGQAA
GLRYCPHYLG GGIGLLHSAH LLAAAGGGGI LEIDANPNPL RTALAPALSR VTEGRCSLGE
QPGIGVAPDL NAVAQLAAAG C
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