| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5518 |
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| Symbol | |
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| ID | 7975375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 219670 |
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| End bp | 220395 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796104 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_002947378 |
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| Protein GI | 239820193 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0560672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCCA AGTTTCTCGA CAGTCCGATG CCGCGCTACC ACCAGCTGGC GGACCTGCTG
CGCCAGCGCA TCGCGCGCGG CATCTGGCCG CGCGAGCACC GGCTGCCCTC GCTCGATGAA
CTGACGGCGG AATTCGGCGT GGCGCGCGTC ACGGTGCGCC AGGCGATCGA CCTGCTCGCG
CGCGAGGGCC TGGTGTCGCC GCAGCAGGGC CGCGGAACCT TCGTCACCGG CATGCCCAAC
CGCGACCGTT TCATCAGCGT GGTCACCAGC CTGGACGAGC TCGCGCGCGT CTACGAGGAC
ACGCAGCCGA AGATCATGAA CATCGACGAG GCGGCCACCT CCCCGCCGCT CGCACCGGGC
GAAGGGCAGC CCGCCGCGCG CTACGCCTTC ATGCGCCGCG TGCACTTCCG CGACGGCCGC
GCCTACTGCG TCATCAACAT CTACCTGGAC GAGCGCATCT TCCGCAAGGC GCCCGAGAAG
TTCCGCACCA GGACCGTGAT CCCGCTGCTG ATCGCGATGA AGAGCGTGAA GATCGCCGCG
GCGCACCAGG TGCTGACCAT CGGCACGGCC GACATGGAAG TGGCCGGGCT GCTGAAGCTG
CCGATGAACG CGCCCGTGGC CGAGGTGCGC CGCATCTTCA AGGACGCGGA GGACACCGTG
ATCTACCTGG CCGACGTCAC CTACCGCGGC GATGCCATCC GCGTCGAAAT GAACCTGAAA
CCATGA
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| Protein sequence | MSSKFLDSPM PRYHQLADLL RQRIARGIWP REHRLPSLDE LTAEFGVARV TVRQAIDLLA
REGLVSPQQG RGTFVTGMPN RDRFISVVTS LDELARVYED TQPKIMNIDE AATSPPLAPG
EGQPAARYAF MRRVHFRDGR AYCVINIYLD ERIFRKAPEK FRTRTVIPLL IAMKSVKIAA
AHQVLTIGTA DMEVAGLLKL PMNAPVAEVR RIFKDAEDTV IYLADVTYRG DAIRVEMNLK
P
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