| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5512 |
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| Symbol | |
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| ID | 7975369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 212643 |
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| End bp | 213854 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796098 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_002947372 |
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| Protein GI | 239820187 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAACC ACCTTTCCAT GCAACCCCTG GCCGGCGTGC GCGTACTCGA CCTGTCGCGC
GTGATGGCCG GCCCGCTGTG CGGCATGGCG CTGGCCGACC TGGGCGCCGA CGTGATCAAG
GTCGAGCATC CCGAACGCGG CGACGACACG CGCGACTGGG GCGTGCGCAT CGGCCGCCAC
AACACCTCCT ACTTCAACAG CTGCAATCGC AACAAGCGCT CCATCTGCGT GGACCTGCAG
GACGAGGACG GCCAGGCGCT CGTGCGCGAG CTCGCGGCGC AGTGCGACGT GGTGATCCAG
AACTTCAAGT ACGGCGGCGC ACAGAAGATG GGCCTGGGCT ACGAGGACCT GCGCAAGCTC
AATCCCGGGA TCATCTACTG CTCGATCTCG GGCTACTCGG TGCTGGGCCC CGAGAAGGCG
CGGCCGGGGT ACGACCTGGT GATCCAGGGC GAGACCGGCC TCATGGCCAT GAACGGCGAG
GAGGGCCAGG GGCCGCTCAA GTTCGGCATT GCCGCGGTCG ACATGTTCAC CGGCATGTAT
TCGGCCCAGG CGATCCTCGC GGTGCTGTAC GAGCGCACGC GCACCGGAGA AGGCCGCCAC
ATCCAGATGT CGCTCTACGA CAGCGGCATG ATGATCACGT CCTACTACGG CCTGACCGCC
TGGCTCAACG AGGGCGATCC CGCGAAGTTC GGCAACTCGC ATCCGTCCAT CGTGCCCTAC
GGCGTGTTCG AGGCCGCGGA CGGCCCGCTG GTGATCGCCG TCGGCAACAA CAGCCAGTTC
AGGAAGTTCT GCGACGAGGT GATCCTCTGC CCCGAGCTGC CGGCCGATCC GAAGTTCGCC
ACCAACACCG AGCGCGCGAA GCACCGCCAC GAGCTGCTGC CGATCCTGCT CGGCCGCATC
GCGCAGTTCC CGCGCGCCGA CCTGCTCGCA CGCATGGACA AGGCCGGCAT TCCATGCGGC
GAGGTGTTGG GCCTGTACGA GGCGCTGCAG TCAGAGCGGA CGGCGCAGGC CGGCGTCTGG
CACCGTTTCG AGGACGCGGA GGCCGGCGCG CAGGCCGTCC ATGCGCCGCC CTACGTCATC
GACGGCGCGC GCTCGGACGT GCGCCACCCG CCGCCGCACC TGGGGGAGCA CACGGGCGAG
GTGCTGCGCG AATTGCTGGA GATGGGGGAG GGCCGGCTCG ACTCGCTGGT GCGCAGGAGC
GTTATCCGAT GA
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| Protein sequence | MKNHLSMQPL AGVRVLDLSR VMAGPLCGMA LADLGADVIK VEHPERGDDT RDWGVRIGRH
NTSYFNSCNR NKRSICVDLQ DEDGQALVRE LAAQCDVVIQ NFKYGGAQKM GLGYEDLRKL
NPGIIYCSIS GYSVLGPEKA RPGYDLVIQG ETGLMAMNGE EGQGPLKFGI AAVDMFTGMY
SAQAILAVLY ERTRTGEGRH IQMSLYDSGM MITSYYGLTA WLNEGDPAKF GNSHPSIVPY
GVFEAADGPL VIAVGNNSQF RKFCDEVILC PELPADPKFA TNTERAKHRH ELLPILLGRI
AQFPRADLLA RMDKAGIPCG EVLGLYEALQ SERTAQAGVW HRFEDAEAGA QAVHAPPYVI
DGARSDVRHP PPHLGEHTGE VLRELLEMGE GRLDSLVRRS VIR
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