Gene Vapar_5511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5511 
Symbol 
ID7975368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp212303 
End bp212614 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content62% 
IMG OID644796097 
Productplasmid stabilization system 
Protein accessionYP_002947371 
Protein GI239820186 
COG category[R] General function prediction only 
COG ID[COG3668] Plasmid stabilization system protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCTCTC CCGAGGCCGA GGAGCAGCCT GCGGCCTTGT ACAGCTACAT CGCCACCGCA 
GCTTCCCCCG AGATTGCTGC GCGGTACACC GAGGCCATCG TGACCTACTG CGAGGGCCTG
CGCGCTTTTC CCCACCGTGG CACCAGACGC GATGATGTGC GGCCCGGCCT GCGCATCACC
AACTACAGAA AACGCGCGGT GATCGCATTT TCGGTAGACG CCGAGCAGGT GTCCATCATC
GGCGTGTTCT ATGGCGACCA GGACTATGAA ACCATCCTGG ATGAGGACTT CGGGGACGAC
CTGGAACATT GA
 
Protein sequence
MFSPEAEEQP AALYSYIATA ASPEIAARYT EAIVTYCEGL RAFPHRGTRR DDVRPGLRIT 
NYRKRAVIAF SVDAEQVSII GVFYGDQDYE TILDEDFGDD LEH