| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5509 |
|---|
| Symbol | |
|---|
| ID | 7975366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012792 |
|---|
| Strand | + |
|---|
| Start bp | 211332 |
|---|
| End bp | 211640 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644796095 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002947369 |
|---|
| Protein GI | 239820184 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAGA TTGACAAGGA AATGGCGCAG TTCGAGAAGG ACCTGCTCCA GTCCATGGGA
GAAATGAAGC GCGGCGAGCA TGCGGCCGTG CACACGCCCG CGCAGATCGA GGCGCGCAAG
CGTGGCCGGC CTGCTGGCAG TGTGAAGGCC GACGCCAAGG TGTCGACCGC CATCCGGCTG
GAGGCATTGA AGGCGGCCGG GCCCGGTTGG CAGACGCGCG CGAATGACGC ACTGCGCGAT
GTGTTCGTGG CGAAGGCGAC GCCTGGCACT CGTCCAAGAC GCTCGCACAG AGCGCCAGAG
CGAAGCTGA
|
|---|
| Protein sequence | MPKIDKEMAQ FEKDLLQSMG EMKRGEHAAV HTPAQIEARK RGRPAGSVKA DAKVSTAIRL
EALKAAGPGW QTRANDALRD VFVAKATPGT RPRRSHRAPE RS
|
|---|
| |