| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5504 |
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| Symbol | |
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| ID | 7975361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 207335 |
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| End bp | 208468 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644796091 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947365 |
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| Protein GI | 239820180 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTGA ACCAGATTTG GCACTGCCCC CGACCGGAGC TCGCAAAGCG CTACCTGGCC
CTGTTGCAAG CCGGGCCGGT TGTGAGTACG ACCATTTTCG CCCCCCGGCG CACTGGGAAG
ACGGTGTTCC TGCGCAAAGA CCTGACGCCA GCAGCCGACG CTGCCGGCTT CACCGTCGCA
TACGTGGACC TTTGGCAGAC GAGGTTGAAC CCCGGCATCG CGATTGTTCG GGGACTGGAG
GAAGCGCTCA CGCCGAGGAC GTTGGCACAA AGGGCGCTTC ACAAGCTGCA TGAGCCGGTC
AAGAAGGTCA AGGCATCTGG CAGCGCGGGT GAGTTGAAGG GCGCCATCGA GGTTGAGTTG
GGCGACGCGA AAAAGGAAGC CACTGAACTC GCCCTGCGTA TCGAAGAACT CGTTGTCAAG
CTCGTTTCCA AGAAGAAGCT TCTGCTCTTG GTCGATGAAG CTCAGGAACT CGCACGAAAC
AAAGAGAATG AGCTGATGGC AATGGCACTG CGCACCGCCA TCACCAAGAA CAGCGACAAG
CTGCGAGTCG TATTCACCGG CTCATCGCGC ACGCAGCTCG CCAACGTCTT CTCCAACAGC
ACCGCGCCAC TCTTCTCGGT GGGCGCCACT GTTCAAGAGT TCCCGCTGCT TGGCAGAGAA
CTGGTCGAAT TCGTCGCAAA GAAGTTCCAG GTCGCCAGCG GGCGAACCCT GGACGTCGCC
GCAGGATGGA CGGCCTTCCA AGAATTCCAC CAGCAGCCCG AGCCATTTCT CTCGGTGGTC
GTGGCCATGC TCATGGACCC GTCGCTCACC TTCGAGCGCG CAGTGGCAAC CGAAAAGGCA
GAGCAGGACA AGGAGGAAAA CCACGAAGGA ACCTGGGCGT CGCTCGATGC GATGCAGCGC
CAGCTCCTTT TGCTCTTCGT CAACGACCCG CATGCCAAAC CATTCGGAAA GGCCGCGCTT
GCGAAGCTTG CCAAAGCTCT CGGCGTTCCT TCGCTCGCGC CGTCCGACGT GCAGTATTCG
CTCAACAACT TGAAGTCCAA GACCATCATC TCGAAGGCGC CAGGCGGTGT GCATACGTTC
GAAAGCGCGG CGTTCGAGCG CTGGGTTAGG ACATTGGCGC CCGTTAGTCC CTAA
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| Protein sequence | MELNQIWHCP RPELAKRYLA LLQAGPVVST TIFAPRRTGK TVFLRKDLTP AADAAGFTVA
YVDLWQTRLN PGIAIVRGLE EALTPRTLAQ RALHKLHEPV KKVKASGSAG ELKGAIEVEL
GDAKKEATEL ALRIEELVVK LVSKKKLLLL VDEAQELARN KENELMAMAL RTAITKNSDK
LRVVFTGSSR TQLANVFSNS TAPLFSVGAT VQEFPLLGRE LVEFVAKKFQ VASGRTLDVA
AGWTAFQEFH QQPEPFLSVV VAMLMDPSLT FERAVATEKA EQDKEENHEG TWASLDAMQR
QLLLLFVNDP HAKPFGKAAL AKLAKALGVP SLAPSDVQYS LNNLKSKTII SKAPGGVHTF
ESAAFERWVR TLAPVSP
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