Gene Vapar_5498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5498 
Symbol 
ID7975355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp201139 
End bp201900 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content67% 
IMG OID644796085 
Productenoyl-CoA hydratase 
Protein accessionYP_002947359 
Protein GI239820174 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.898188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATCG AACTGGAAGT TTCCGAATAC ATCGCCGTCG TCCGGCTCGA CAAGCCGCCG 
GTCAATGCGC TGGACCGCGC CACGCGCCGC CGCCTGATCG AGATCTTCGA CGAGGTCTCC
GAACGCGCCG ACGTGCGCGT CGCGATCCTC ACGGGCACCG GCAAGTTCTT CTGCTCCGGC
GCGGACCTCA AGGACCGGCC CGATGCGCAG AAGGCCGGCG ACTTCCTCGA CCACAACCGC
TGGACGCGCG AAACGGGCAA TGCGATCCGC GAATGCGCCA AGCCCGTGAT CGCGGCCGTC
AACGGCCCGG CGCTGGGCGC CGGCTTCGGG CTCATGGCGG CCTGCGACAT CTTCCTTGCG
AGCGAGGACG CCACCTTCGC CATGCCCGAG ATCAACGTTG GCCTGGCCGG CGGCGTCTCG
ATGCTGCGCA CCATGTTCGG CCGCTCGTTC ACACGCCGCA TGTTCTTCAC CGGCATGAAG
GTGCCCGCCG CCGAGCTGTA CCGCCGCGGC GTGCTCGACG AGGTGGTGCC GGGCGAGCAG
CTGATGCCGC TGGCCATGGA GATCGCGCAG GAGATCGCCT CGAAGGCGCC GCTCGCCGTC
GCCTATGCGA AGCAGGCGGC CAACATGATG GACCTGATGC CGCAGCGCGA CGGCTACCGC
TTCGAGCAGA ACATCACGAT GGCGCTGGCC AGGACCGAGG ATGCGCAGGA GGCCCGCAAG
GCCTTCCTCG AAAAGCGCAA GCCTGTCTAC AAAGGTCGTT GA
 
Protein sequence
MSIELEVSEY IAVVRLDKPP VNALDRATRR RLIEIFDEVS ERADVRVAIL TGTGKFFCSG 
ADLKDRPDAQ KAGDFLDHNR WTRETGNAIR ECAKPVIAAV NGPALGAGFG LMAACDIFLA
SEDATFAMPE INVGLAGGVS MLRTMFGRSF TRRMFFTGMK VPAAELYRRG VLDEVVPGEQ
LMPLAMEIAQ EIASKAPLAV AYAKQAANMM DLMPQRDGYR FEQNITMALA RTEDAQEARK
AFLEKRKPVY KGR