Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5498 |
Symbol | |
ID | 7975355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 201139 |
End bp | 201900 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644796085 |
Product | enoyl-CoA hydratase |
Protein accession | YP_002947359 |
Protein GI | 239820174 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.898188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATCG AACTGGAAGT TTCCGAATAC ATCGCCGTCG TCCGGCTCGA CAAGCCGCCG GTCAATGCGC TGGACCGCGC CACGCGCCGC CGCCTGATCG AGATCTTCGA CGAGGTCTCC GAACGCGCCG ACGTGCGCGT CGCGATCCTC ACGGGCACCG GCAAGTTCTT CTGCTCCGGC GCGGACCTCA AGGACCGGCC CGATGCGCAG AAGGCCGGCG ACTTCCTCGA CCACAACCGC TGGACGCGCG AAACGGGCAA TGCGATCCGC GAATGCGCCA AGCCCGTGAT CGCGGCCGTC AACGGCCCGG CGCTGGGCGC CGGCTTCGGG CTCATGGCGG CCTGCGACAT CTTCCTTGCG AGCGAGGACG CCACCTTCGC CATGCCCGAG ATCAACGTTG GCCTGGCCGG CGGCGTCTCG ATGCTGCGCA CCATGTTCGG CCGCTCGTTC ACACGCCGCA TGTTCTTCAC CGGCATGAAG GTGCCCGCCG CCGAGCTGTA CCGCCGCGGC GTGCTCGACG AGGTGGTGCC GGGCGAGCAG CTGATGCCGC TGGCCATGGA GATCGCGCAG GAGATCGCCT CGAAGGCGCC GCTCGCCGTC GCCTATGCGA AGCAGGCGGC CAACATGATG GACCTGATGC CGCAGCGCGA CGGCTACCGC TTCGAGCAGA ACATCACGAT GGCGCTGGCC AGGACCGAGG ATGCGCAGGA GGCCCGCAAG GCCTTCCTCG AAAAGCGCAA GCCTGTCTAC AAAGGTCGTT GA
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Protein sequence | MSIELEVSEY IAVVRLDKPP VNALDRATRR RLIEIFDEVS ERADVRVAIL TGTGKFFCSG ADLKDRPDAQ KAGDFLDHNR WTRETGNAIR ECAKPVIAAV NGPALGAGFG LMAACDIFLA SEDATFAMPE INVGLAGGVS MLRTMFGRSF TRRMFFTGMK VPAAELYRRG VLDEVVPGEQ LMPLAMEIAQ EIASKAPLAV AYAKQAANMM DLMPQRDGYR FEQNITMALA RTEDAQEARK AFLEKRKPVY KGR
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