| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5488 |
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| Symbol | |
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| ID | 7975182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 189826 |
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| End bp | 192036 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796075 |
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| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
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| Protein accession | YP_002947349 |
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| Protein GI | 239820164 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCG ACACGCCCGC CACGACCAAT CCGATCGACC AGCTCAAGAT CATCGGCAAG
CCGACCGACC GCATCGACGG CCCGATGAAG ACCACCGGCA CCGCACGCTA CGCCTACGAA
CGCCACACCG AAGTACCCAA CGCCGCCTAC GGCTGGGTGG TGGGCGCCGG CATAGCGAAA
GGCCGCATCG CCTCGATGGA CCTGGACGCC GCGCGCGCCG CGCCGGGCGT GCTGGCCATC
GTCACGGCGC GCAATGCCGG CAAGCTCGGC AAGGGCGACT TCAACACGGC CAAACTCCTG
GGCGGCCCCG AGATCGACCA CTACCACCAG GCGGTCGCAT TGGTCGTCGC CAACACCTTC
GAGCAGGCGC GCGCCGCGGC GCAGCTGGTG CGCATCGCCT ACACGCGTGC GCCGGGCCGC
TTCGACCTGG CCGCCGAAAA GGATGCGGCG CAGATGCCCA AGGCCGATCC GTTTTCCGGC
GAGCCGCTGA CAAAGGCGGG CGACTTCGCG GGCGCGTTCG CCGCGGCCCC CGTGCAGCTC
GATGCCACCT ACACCACGCC CGACGAATCG CACGCCATGA TGGAGCCGCA CGCCTCCATG
GCACAGTGGC AGGGCGACAA GCTCACCATC TGGACCTCGA ACCAGATGAT TGCCTGGGGC
GTCGGCGATG TCGCCAAGAC GCTCGGCATC CCGAAGGCGA ACGTGCGCCT CGTTTCGCCT
TTCATCGGCG GCGGCTTTGG CGGCAAGCTG TTCGTGCGCG CCGATGCATT GCTGGCCGCG
CTGGGCGCCC GGGCGGCCAA GCGGCCCGTG AAGGTGGCCT TGCAGCGGCC CTTGATGATG
AACAACACCA CGCACCGGCC CGCGACCATC CAGCGCATCC GCATCGGCGC CGAGAGAGAC
GGCAAGATCA CCGCCATCGC GCACGAAGGC TGGTCCGGCG ACTTGCCGGG CGGACAGCCG
GAAACCGCGG TCAACCAGAG CCGGCTGCTG TACGCCGGTG CCAACCGCCT GACGACCACG
CGGCTGGCCG TGCTGGACCT GCCCGAGGGC AACGCCATGC GCGCGCCCGG CGAGGCGCCG
GGCATGATGG CGCTGGAAAT CGCGATGGAC GAGATGGCGG AGAAGCTCGC GCTCGACCCG
GTCGAATTCC GCGTGCGCAA CGACACGCAG GTCGATCCGG AGAAGCCGCA GCGTCCGTTT
TCGCAGCGCA GGCTGGTCGA ATGCCTGCGC ACGGGCGCCG AGCGCTTCGG CTGGAGCCGG
CGCAATGCCA CGCCGGGGCA GCAGCGCGAC GGTCGCTGGC TCGTGGGAAT GGGCATGGCC
GCGGCGTTCC GCAACAACCT CCTGATGAAG TCGGCCGCGC GTGTGCGGCT GGACAACCGG
GGCATGGTCA CGGTGGAAAC CGACATGACC GACATCGGCA CCGGCACGTA CACCATCATT
GCGCAGACCG CCGCCGAGAC CATGGGCGTG CCGCTGGACC GGGTGCTCGT GCGCCTGGGC
GATTCGGCCT ATCCCGTGTC GTCCGGCTCG GGCGGGCAGT GGGGCGCCAA CAACTCCACC
TCGGGTGTCT ACGCAGCCTG CATGAAGCTG CGCGAGGCCG TCGCGAGCAA GCTGGGCTTC
GGCGCGGTTG ACGTGGAATT TGCCGACGGC ATGGTGCGCG CCGGCGAGCG TGCGGTGCCG
CTCGCCGAAG CGGCGGGCGC CGAAGGTTTG ATGGCCGAGG ACGGCATCGA GTACGGCGAC
CTCGACAAGA AGTACCAGCA GTCCACCTTC GGCGCGCATT TCGTGGAGGT GGGCGTCGAC
GCCGCCACCG GCGAGATCCG CGTGCGGCGC ATGCTCGCGG TGTGCGCGGC GGGGCGCATC
CTGAACCCCA AATCGGCGCG CAGCCAGGTG ATCGGTGCCA TGACGATGGG CGTCGGCGGG
GCGCTGATGG AAGAGCTGGC GCTCGACAAG CGGCATGGTT TCTTCGTCAA CCACGACCTC
GCGGGCTACG AGGTGCCGGT GCATGCCGAC ATTCCCCACC AGGAGGTGAT CTTCCTCGAC
GAGACCGACC CGATCTCCTC GCCGATGAAG GCCAAGGGCG TCGGGGAACT GGGCATATGC
GGCGTCGCGG CCGCAGTGGC CAACGCGGTC TACAACGCCA CGGGCGTCCG GGTGCGCAAC
TATCCGATCA CGCTCGACAA GCTGCTGGAC CGGTTGCCGC CGGTGGTGTG A
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| Protein sequence | MKFDTPATTN PIDQLKIIGK PTDRIDGPMK TTGTARYAYE RHTEVPNAAY GWVVGAGIAK
GRIASMDLDA ARAAPGVLAI VTARNAGKLG KGDFNTAKLL GGPEIDHYHQ AVALVVANTF
EQARAAAQLV RIAYTRAPGR FDLAAEKDAA QMPKADPFSG EPLTKAGDFA GAFAAAPVQL
DATYTTPDES HAMMEPHASM AQWQGDKLTI WTSNQMIAWG VGDVAKTLGI PKANVRLVSP
FIGGGFGGKL FVRADALLAA LGARAAKRPV KVALQRPLMM NNTTHRPATI QRIRIGAERD
GKITAIAHEG WSGDLPGGQP ETAVNQSRLL YAGANRLTTT RLAVLDLPEG NAMRAPGEAP
GMMALEIAMD EMAEKLALDP VEFRVRNDTQ VDPEKPQRPF SQRRLVECLR TGAERFGWSR
RNATPGQQRD GRWLVGMGMA AAFRNNLLMK SAARVRLDNR GMVTVETDMT DIGTGTYTII
AQTAAETMGV PLDRVLVRLG DSAYPVSSGS GGQWGANNST SGVYAACMKL REAVASKLGF
GAVDVEFADG MVRAGERAVP LAEAAGAEGL MAEDGIEYGD LDKKYQQSTF GAHFVEVGVD
AATGEIRVRR MLAVCAAGRI LNPKSARSQV IGAMTMGVGG ALMEELALDK RHGFFVNHDL
AGYEVPVHAD IPHQEVIFLD ETDPISSPMK AKGVGELGIC GVAAAVANAV YNATGVRVRN
YPITLDKLLD RLPPVV
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