| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5482 |
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| Symbol | |
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| ID | 7975176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 183511 |
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| End bp | 185304 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796069 |
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| Product | Tannase and feruloyl esterase |
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| Protein accession | YP_002947343 |
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| Protein GI | 239820158 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCACA TCGTGTCATC GTCCTGGCGG CCGGCATGGG CCGCGGTGGG TGCGGCCGCA
TTGCTCGCGG CCTGTGGCGG AGGCGGCGGC GGGAGCGGCG GCTTTGCGTT CCTGCCGATC
GTTCCGGCCG CGCCGGCGGC ACCGCCGCCT GCGCCACCCG CACCGCCGCC CGCGGCCTCG
CGGGAGGCGA GGCCCGGCAC GCTGCAGTCG TGCAGCGACC TCGCGAGCAA GGCCGCCTTC
AATGGCACGG CCTACACCAG CATCACTTCC GTGGCGGCCG GCACCCTCAC GGTGGCGGGC
GTGGGCACAC CCACGCCGGC GCACTGCCTG GTGCAGGGAA AGATGAACGA GCGCAGCAGC
AGCGTCGACG GCCGCACCTA TGCGATCGGC TTCGAGATGC GCCTGCCGGT CGACTGGAAC
GGGCGCTTCT TCTACCAGGC CAACGGCGGG CTGGACGGAA GCGTGGTGCC GGCCACGGGC
GGCGTCGGGG GCGGGTCGCC CACGACCACT GCGCTGCACA TGGGCTTTGC CGTGATCAGC
TCCGATGCGG GCCACTCGGG CGCGCAGAAC CCGGTCTTCG GCATCGATCC GCAGGCGCGC
CTGGCCTACG GCTACAACGC CGTCGCGCAG CTCACGCCGA TGGCCAAGAA CCTGATCGCC
AAGGCCTATG GCCGCGCGGC CGACCGCTCC TACTTCGGCG GCTGCTCGAA CGGCGGCCGC
CATGCGATGG TTGCGGCCGC GCGCTCCGCC AACGATTACG ACGGCATCTT GGCGGGCAAT
CCCGGCTTCA ACCTGCCGAA GGCCGCGGTC GCGCAGCTCT ACGGCGTGCA GCAGTACGTG
CAGGTGACGA CCGCCAACAC GCCGGCCGGC AAGCCGGACC TGCAGACGGC CTTCACGCAG
GCGGAGATGG ACACGGTCGC CGGCGCCGTG CGGGCCAAGT GCGACGCGCT CGACGGCGCA
ACCGACGGCA TCGTCGCGAA TGTGCAGGCC TGCAAGACGG CCTTCAAGCT GGCCACCGAC
GTGCCCACCT GCAGCGGCGC GCGCGACGGC AGCTGCCTCA CGGCCGCGCA GAAGACGGTG
CTCGACAACG TCTTCGGCGG TGCGCGCAAC ACCGCGGGCA CTGCGCTCTA CAACGGCTTT
CCGTATGACG CGGGCATCAA CGGCGCCGAT TGGCGGCAAT GGAAGTTCTC CAACTCGCAG
AACCTGGACA CGGCCGCGGT CGGCTTCGTG TTCAGCTCGC CGCCGCTGGG CACGAGCCGT
CCCTCGGGCA TCGACTTTGC GCTGGGCTTC AGCATGGACG CCGATGCGCC GGGCATCTTC
GCGACCACCG CGCTCTACAC CGAGTCGGCC ATGTCCTTCA TGACGCCGCC GAACCCGGGC
AACCTCGCGG TGCTGCGCGA CCGCGGCAGC AAGCTCATGG TCTATCACGG CACCAGCGAC
GCGGTGTTCT CGTCGGACGA CACGACGCGC TGGTACGACG AGTTGCGCGC GGCCAATGGC
GGCGATGCCT CCGGCTTTGC GCGCTTCTTC CCGGTGCCCG GCATGAACCA CTGCGGGCGA
GGCCCGGCCA CGGACCAGTT CGACATGCTG ACGCCGCTGG TGGCCTGGGT GGAGAAGGGC
AAGGCGCCGG ATGCCGTGGT CGCCGCCGCG CGCGGTGCGG GGGCCAACGT GGTCAACACG
GAACTGCCCG CCGGCTGGTC GGCCACCCGC ACCCGGCCCC TGTGCCCGTA TCCGAAGGTG
GCGACCTACG TGGGCGGCGA TCTCGAATCG GCTGCCAGCT TCGCCTGCAA GTAG
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| Protein sequence | MDHIVSSSWR PAWAAVGAAA LLAACGGGGG GSGGFAFLPI VPAAPAAPPP APPAPPPAAS
REARPGTLQS CSDLASKAAF NGTAYTSITS VAAGTLTVAG VGTPTPAHCL VQGKMNERSS
SVDGRTYAIG FEMRLPVDWN GRFFYQANGG LDGSVVPATG GVGGGSPTTT ALHMGFAVIS
SDAGHSGAQN PVFGIDPQAR LAYGYNAVAQ LTPMAKNLIA KAYGRAADRS YFGGCSNGGR
HAMVAAARSA NDYDGILAGN PGFNLPKAAV AQLYGVQQYV QVTTANTPAG KPDLQTAFTQ
AEMDTVAGAV RAKCDALDGA TDGIVANVQA CKTAFKLATD VPTCSGARDG SCLTAAQKTV
LDNVFGGARN TAGTALYNGF PYDAGINGAD WRQWKFSNSQ NLDTAAVGFV FSSPPLGTSR
PSGIDFALGF SMDADAPGIF ATTALYTESA MSFMTPPNPG NLAVLRDRGS KLMVYHGTSD
AVFSSDDTTR WYDELRAANG GDASGFARFF PVPGMNHCGR GPATDQFDML TPLVAWVEKG
KAPDAVVAAA RGAGANVVNT ELPAGWSATR TRPLCPYPKV ATYVGGDLES AASFACK
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