| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5478 |
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| Symbol | |
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| ID | 7975172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 178611 |
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| End bp | 180452 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796065 |
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| Product | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein |
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| Protein accession | YP_002947339 |
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| Protein GI | 239820154 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCA TTCCACAAAT TGAGGCGGTC AACGATTTCG TCATCAAGTT CGCCAACGTC
AACGGCTCGG GATCGGCCTC GGCCAACGAG CTGTTCGCCA AGGCCATCCT GCGCATGGGC
GTGCCGGTGA GCCCGCGCAA CATCTTCCCG AGCAACATCC AGGGCCTGCC GACCTGGTAC
GAGGTGCGCG TGACCGAAGA CGGCCACCTG GGCCGGCGCG GCGGCACCGA CATGATGGTG
GCGATGAACC CGCAGACCTG GGACGCCGAC GTGGCCGAAC TCGAGCCCGG CGGCTACCTG
TTCTACGACA GCACGCGGCC GCTGCCGCCC TCGAAGTTCC GCAGCGACGT CCGCGTGATC
GGCATGCCGC TGACCGAGAT CTGCAACGCC GTCTACCAGG ACCCGCGGCA GCGCCAGCTG
TTCAAGAACA TCGTCTACGT GGGCGCGCTG GCCATCCTGC TGGGCATCGA GCCCGAGGTG
GTCGAGAAGC TGTTCGGCGA GCAGTACAAG GGCAAGGAAA AGCTGCTCGC CTCCAACGTG
CAGGCGCTGC ACCTGGGCTG CGACTTCGCG CGCGAGAACC TCGAGCTGCT GGGCCTCAGG
GTGCGGCGCG CCGACCGGGT GGGCGAGCGC ATCTTCGTGG ACGGCAACAG CGCCGCGGCG
CTGGGCTGCG TGTATGGCGG CGCCACGGTG GCGGCCTGGT ATCCGATCAC GCCGTCGTCC
TCGGTGGCCG AGGCCTTCCA GAAATATTGC GCCAAATTCC GCGTGGACCC GGCCACCGGG
CAGCACCGCT TTGCCATCGT GCAGGCGGAG GACGAGCTGG CTTCCATCGG CATGGTGGTC
GGCGCGGGCT GGAACGGCGC ACGCGCCTTC ACGGCGACCT CGGGCCCCGG CATCTCGCTG
ATGGCCGAGT TCATCGGCCT GGCCTACTTT GCCGAGATCC CGGTCACGCT CATCAACGTG
CAGCGCGGCG GCCCATCGAC GGGCATGCCG ACGCGCACGC AGCAGGCCGA CATCCTGGCC
TGCGCCTACG CCTCGCACGG CGACACCAAG CACGTGCTGC TGTTTCCGGA AGACCCGCAC
GAATGCTTCG AGCATGCGGC GGCGGCGCTG GACCTGGCCG ACCGGCTGCA GACGCCGGTG
TTCCTGATGA CGGACCTGGA CATCGGCATG AACCAGCGCC TGTGCGCGCC CTTTGCCTGG
GACGACAGCC AGGCCTACGA CCGCGGCAAG CTCATGAGCG CCGAGGAACT CGAGGCCGGC
CGCGACTTCG GCCGCTACAA GGACGTGGAC GGCGACGGCA TCCCCTGGCG TACGCTGCCG
GGCACGCACC CGAGCAAGGG CAGCTACTTC ACCCGCGGCA CCACGCGCGA TGCCTATGCC
CGATATTCGG AGCGCGGGCC GGACTACATC TACAACATGG AGCGGCTGCT GAAGAAGTTT
GCGACCGCGG CCACGCTGGT GCCGCAGCCG GTGCTGCGCC CGGCTGCCCA GAAGACCGAG
CTGGGCGTGA TCTATTTCGG TTCGACCAGC CCGTCGATGC ACGAGGCGCT GCAGGCACTG
GAAGAACGCG GCATCCACCT GGACGCGCTG CGGCTGCGCG CCTTTCCGTT TCCGCAGAGC
GTGGTGCAGT TTCTCGCGCA GCACCGGCAG GTGTTCGTGG TCGAGCAGAA CCGCGACGCG
CAGATGCGCA GCCTGCTGGT CAACGAGCTG GACGTCGATC CCGCCCGGCT GGTGCGGGTG
CTGCATTTCG ACGGCACGCC CATCACGGCG CGCTTCATCG TCCAGGCCAT CAGCACGCAT
GTGCAGAAGA CGCAAGCCTC CGGCACGAAG GAATCTGCAT GA
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| Protein sequence | MSAIPQIEAV NDFVIKFANV NGSGSASANE LFAKAILRMG VPVSPRNIFP SNIQGLPTWY
EVRVTEDGHL GRRGGTDMMV AMNPQTWDAD VAELEPGGYL FYDSTRPLPP SKFRSDVRVI
GMPLTEICNA VYQDPRQRQL FKNIVYVGAL AILLGIEPEV VEKLFGEQYK GKEKLLASNV
QALHLGCDFA RENLELLGLR VRRADRVGER IFVDGNSAAA LGCVYGGATV AAWYPITPSS
SVAEAFQKYC AKFRVDPATG QHRFAIVQAE DELASIGMVV GAGWNGARAF TATSGPGISL
MAEFIGLAYF AEIPVTLINV QRGGPSTGMP TRTQQADILA CAYASHGDTK HVLLFPEDPH
ECFEHAAAAL DLADRLQTPV FLMTDLDIGM NQRLCAPFAW DDSQAYDRGK LMSAEELEAG
RDFGRYKDVD GDGIPWRTLP GTHPSKGSYF TRGTTRDAYA RYSERGPDYI YNMERLLKKF
ATAATLVPQP VLRPAAQKTE LGVIYFGSTS PSMHEALQAL EERGIHLDAL RLRAFPFPQS
VVQFLAQHRQ VFVVEQNRDA QMRSLLVNEL DVDPARLVRV LHFDGTPITA RFIVQAISTH
VQKTQASGTK ESA
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