| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5467 |
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| Symbol | |
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| ID | 7975161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 168345 |
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| End bp | 169166 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796054 |
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| Product | alpha/beta hydrolase fold protein |
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| Protein accession | YP_002947328 |
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| Protein GI | 239820143 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAC TCACCCTGCG CGACGGCACC GAGCTCTACT ACAAGGACTG GGGCTCGGGC
CAGCCCATCC TCTTCAGCCA CGGCTGGCCG CTGAGCGCCG ACATGTGGGA CGCCCAGATG
CTGTTCTTCG CCGAACGCGG CTACCGCGCG ATCGCCTTCG ACCGGCGCGG CTTCGGCCGC
TCCAGCCAGC CGTGGACCGG CTACGACTAC GACACCTTCG CCGACGACAT CGCCGAGCTG
GTCGAGACGC TCGACCTCAA GGACGTGGTG CTCGTGGGCT TCTCGATGGG CGGCGGCGAC
GTGGCGCGCT ACATCGCGCG CAAGGGCAGC GCACGCGTGA CGAAGCTCGC GCTCATCAGC
GCCGTGACGC CGCTGTTCAT GAAGACGCCC GACCATCCGG TGGGCCCGGA TGCCTCGCTC
TTCGCCGGCA TCCGCGCCGG GCTGGCCGCG GACCGTCCGC AGTTCCTCGA CGACTTCAGC
ACGCTCTTCT ACGGCACCAA CCGCCCCGGT GCGAAGGTCT CGCAAGGCAT CTTCAAGCAG
ACGCTGCAGA TCGCGCTGCA GGCCTCGGCC AAGGCCACCA TCGACTGCGT GACCGCGTTC
TCCGAAACCG ACTTTCGCCC CGACATGGCC AAGATCGACG TGCCCACGCT CGTGATCCAC
GGCGACGACG ACCAGGTGGT GCCCGTCGAG GCCACGGGCA AGCTCGCGGC CGAGATGATC
AAGGGCAGCC AGCTCAAGGT CTACGCCGGC GCGCCGCATG CCACCTGCAC CACGCACAAG
GACCAGGTGA ACGCCGACCT GCTGGCCTTC ATCCAGGCCT GA
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| Protein sequence | MTTLTLRDGT ELYYKDWGSG QPILFSHGWP LSADMWDAQM LFFAERGYRA IAFDRRGFGR
SSQPWTGYDY DTFADDIAEL VETLDLKDVV LVGFSMGGGD VARYIARKGS ARVTKLALIS
AVTPLFMKTP DHPVGPDASL FAGIRAGLAA DRPQFLDDFS TLFYGTNRPG AKVSQGIFKQ
TLQIALQASA KATIDCVTAF SETDFRPDMA KIDVPTLVIH GDDDQVVPVE ATGKLAAEMI
KGSQLKVYAG APHATCTTHK DQVNADLLAF IQA
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