| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5459 |
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| Symbol | |
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| ID | 7975153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 160886 |
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| End bp | 161413 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796047 |
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| Product | OHCU decarboxylase |
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| Protein accession | YP_002947321 |
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| Protein GI | 239820136 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3195] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03164] OHCU decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTCA CCGCCACCCG CCTGAACCTG GCCGCGCTCA ACGACATGGA CCGCGACGCT
TTCGTCGCGG CCGTCGGCCC GGCCTTCGAG AACGCCCCCT GGATCGCGCA GGCCGCCTGG
ACGCGCAGGC CCTTCGCCAG CATCGATGCG CTGCATGGCG CCATGCTCGA CGTGGTTCGC
CAAGCGCCCC AGGAGCACCG CCTCGCCTTC CTGCGCGGCC ACCCGGAACT GGCTGGCCGC
GAGGCCCGGG CCGGCACCAT GACGGCCGAG TCCGTCGGCG AGCAGCGCAG CGCAGGCCTC
GACGCGCTCA GCCGCGAAGA GCTGGGCGAG ATGCAGCGCC TGAACCGCAG CTACCGCGAG
CGCCATGGCT TTCCTTTCAT CATCGCCGTG CGCCGCAATA CCAAGGATCA GATATTCGAG
GCGCTGCGCA TGCGTGCGGC GGCGAGCACA GAGGCCGAGC ACCGTGCCGC GCTCGAGCAG
ATCGGCTTCA TCACCCGCGG GCGCATCGAC GCCCTGGTGG ACGGCTGA
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| Protein sequence | MTLTATRLNL AALNDMDRDA FVAAVGPAFE NAPWIAQAAW TRRPFASIDA LHGAMLDVVR
QAPQEHRLAF LRGHPELAGR EARAGTMTAE SVGEQRSAGL DALSREELGE MQRLNRSYRE
RHGFPFIIAV RRNTKDQIFE ALRMRAAAST EAEHRAALEQ IGFITRGRID ALVDG
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