| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5436 |
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| Symbol | |
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| ID | 7975130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 139311 |
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| End bp | 140066 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796024 |
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| Product | NmrA family protein |
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| Protein accession | YP_002947298 |
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| Protein GI | 239820113 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCG TCGTCATCGG CGGCTCGGGC CTCATCGGCT CCAAGGTCGT CAGCAAGCTG
CGCGAAGCCG GCCATGAGGT CGTTGCCGCA TCGCCCGCAT CGGGCGTCAA CACCATCACC
GGCGAAGGCC TGGCCGAGGC CCTCAAGGGC GCGCAGGTGG TGCTGGACGT GGCCAACTCG
CCTTCGTTCG AGGACAAGGC CGTGCTCGAA TTCTTCGAGA CCTCGGGGCG CAATCTCCTG
GCCGCGGAAG CCGTGGCCGG CGTGAAGCAC CACGTCGCGC TGTCGGTGGT CGGCACCGAC
CGCCTCTCCG AAAGCGGCTA CTTCCGCGGC AAGATCGCAC AGGAAAAGCT GATCCGCGAA
TCGAAGATTC CCTACACCAT CGTCCATTCG ACGCAGTTCT TCGAATTCCT CGGTGGCATT
GCGCAGTCGG GCACCGACGG CGACACCGTG CGCCTCTCGC CGGCCTTCGT GCAGCCGATC
GCATCGGACG ACGTCGCGGC CGCCGTGGCC GACTACACCC TGGGCAAACC AGTGAATGGC
GTGGTCGAGA TTGCCGGCCC CGAGCGCGTT CGCCTGTCCG ACCTGGTGCA GCGCTTTCTC
GCCAAGACCA GCGATCCGCG CAAGGTCGTC CAGGACGTGC ACGCGCGCTA CTTCGGTGCG
GAGCTGAAGG ACGAAACGCT GGTGCCCGGT CCCAACCCGC GCATCGGTGC CCTCGGCTTC
GAAGCCTGGT TCGCGCTGCC CAAGCCGGCA CGCTGA
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| Protein sequence | MKIVVIGGSG LIGSKVVSKL REAGHEVVAA SPASGVNTIT GEGLAEALKG AQVVLDVANS
PSFEDKAVLE FFETSGRNLL AAEAVAGVKH HVALSVVGTD RLSESGYFRG KIAQEKLIRE
SKIPYTIVHS TQFFEFLGGI AQSGTDGDTV RLSPAFVQPI ASDDVAAAVA DYTLGKPVNG
VVEIAGPERV RLSDLVQRFL AKTSDPRKVV QDVHARYFGA ELKDETLVPG PNPRIGALGF
EAWFALPKPA R
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