| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5435 |
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| Symbol | |
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| ID | 7975129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 138768 |
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| End bp | 139247 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644796023 |
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| Product | alkylhydroperoxidase like protein, AhpD family |
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| Protein accession | YP_002947297 |
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| Protein GI | 239820112 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCAAC GTGTCAACTA TGTCGAGCAA TCGCCCGAAC TCTTCAAGAA GTTCGTCGAG
TTCCTCAACG CGATCAAGGA AGGCGCCATC GAAGAGCCGA TCCGCAACCT GGTGTCGATC
CGCACCTCGC AACTCAACGG CTGCGCGTTC TGCCTGGACA TGCACGTCAA GCAGGCCAGG
ATCCAGGGCG AGCGCGAGCT GCGCCTGTAC CACCTGGCCG CATGGCGCGA ATCGACGCTG
TTCATTCCGC GCGAACGTGC GGCGCTGGCC TGGACCGAGG TGCTGACCAG GCTGCCCGAG
CAAGGCGTGC CCGACGACAT CTACGAGCGC GTGCGCACGC AGCTGTCGGA GAAGGAAATC
TCCGACCTCA CCTTCCTCGT CATGTCCACC AACGCATGGA GCCGCCTGAA CATCGGCTTC
AAGAGCGTGC CCGGCGCCTC GGACAAGGTC TTCGGCCTGG ACAAGGCAAA GCTCGCCTGA
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| Protein sequence | MTQRVNYVEQ SPELFKKFVE FLNAIKEGAI EEPIRNLVSI RTSQLNGCAF CLDMHVKQAR
IQGERELRLY HLAAWRESTL FIPRERAALA WTEVLTRLPE QGVPDDIYER VRTQLSEKEI
SDLTFLVMST NAWSRLNIGF KSVPGASDKV FGLDKAKLA
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