| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5431 |
|---|
| Symbol | |
|---|
| ID | 7975125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012792 |
|---|
| Strand | + |
|---|
| Start bp | 136282 |
|---|
| End bp | 137181 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644796019 |
|---|
| Product | Glutathione S-transferase domain protein |
|---|
| Protein accession | YP_002947293 |
|---|
| Protein GI | 239820108 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCT TCTACATGCC CGGAGCCAGC GCACTGGCCG ACCACATCGT GCTCGAGTGG
TCCGGCCAGC CCTACGAGGC GGTGCGCATG GACCGCCGCA GCATCAAGAT GCCGGAGTAC
CTGGCGCTCA ACCCGGCCGG CGTGGTGCCG CTGCTCGTGC ACGGCGACTT CACGCTGAGC
GAGAACGTCG CCATCCTCGG CTACCTCGCG GACCTGCATC CGCAGCTGCA ACTGGCGGGC
GACGGTTCGC CGCGCGCGCG GGCGGAGGTG ATGCGCTGGC TCGGCTTCCT GAACTCCGAT
GTGCACAAGG CGTTCAGGCC GATCTTCTTT CCCGAGCGCT ACCTGCCGGA CGGCGGCCTG
GCGGCGCAGC TGGCCGCCAC GGCACGCGGC CACGTGCGCG AGTACCTTGG GCGGCTCGAT
GCGCAGCTCG AAGGCCGCGA ATGGCTCACG GGCCGGCGCT CCATTGCCGA CGCGTACCAC
TTCGTGATGC TGCGCTGGGC CATCGGCACG AAGGTCGGGC TGCACGGCTT CGAGAACCTG
ACGGCCTTCG TTCGCCGGAT GCATGCCGAC GAGGGCGTGC ATGCGGCCCT CGTGATGGAG
GAAGGGCTGG CGCCGCGCAC CGAGCGCGCG CACAGCGCGC CCGATCAATT GATGCGCCTG
AACGAACGGA TCCGCGACAA CCTGGCCACC ACGCTGAACG CCGAAGTGGT CGGGCTGGTG
GAGTACAGCG AAGGCGACGG CGCCGAGCTC GAAGTGCGCC GGGGCCTCGT GGAGATCGAG
GTCTCGCGGA TGGACACGGT CTTCAGCTGG CGGGACGAAA ACTACCGCGG CCAGGCGGCC
ATTCCCTTCG AGAATTTCTC GCGCTATGTC AGCAATGGCG CGATCCGGCT CGATCTGTAG
|
|---|
| Protein sequence | MKLFYMPGAS ALADHIVLEW SGQPYEAVRM DRRSIKMPEY LALNPAGVVP LLVHGDFTLS
ENVAILGYLA DLHPQLQLAG DGSPRARAEV MRWLGFLNSD VHKAFRPIFF PERYLPDGGL
AAQLAATARG HVREYLGRLD AQLEGREWLT GRRSIADAYH FVMLRWAIGT KVGLHGFENL
TAFVRRMHAD EGVHAALVME EGLAPRTERA HSAPDQLMRL NERIRDNLAT TLNAEVVGLV
EYSEGDGAEL EVRRGLVEIE VSRMDTVFSW RDENYRGQAA IPFENFSRYV SNGAIRLDL
|
|---|
| |