| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5425 |
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| Symbol | |
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| ID | 7975119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 130954 |
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| End bp | 131832 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796013 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002947287 |
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| Protein GI | 239820102 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAATG CCACCGATGA ATCTAGTGGC GATGCGCGGA TTCGAATGCC TGCAGGCCGA
CTGAATATGC GCAAATCCGG TCAAGATGAA CGCCTGGGCA CGCATCGCCA AGGCGCCTGG
ACCTTCGAAT TCGACAAGAT GGAGGCGCGC GTTGCCGCCG TGCGGATTCG CACCGAGGCG
CTCGCGGAGG GATTGCCGGC GCACCAGCAT CCGCAGGGGC AGCTGGCGAT GGTGTTGCGC
GGCACCGTGA CCTGTGAAGT GCCGGGTGCG CTGTGGATGG CACCGCTGCA CGGTGGCTTG
TGGATCCCCG GGGGCGTGCC CCACAGCCTG CGCGTTTCGG CGGAGGGGAA TGTCTGCTTT
CTGTTCGTGG AAGATGCCGC CGCGGCCATG CCGCAGACCT GCTGCTCGTT GAGCGTCAGC
CCCTTGCTGC GCGAGCTCAT TCTTTACCTG GCCGCCTTGC CCGAGGGTGC GCAGCGCGAG
CCGCAGGCGC TGCGGCTGCA TGCCGTGCTG CTGGACCAGC TGGCGCGCAT GCCGACCGAA
GCCATGCACC TGCCGGTGTC GGAGGAGCCG CGCCTGCGCC GCCTGATCGA TGCGCTCATG
CGCGACCCGG CGGACCGCAC CACCGCAGCG CAGTGGGCCT CGCGCCTGGC CATGAGCGAG
CGGACCCTGA CCCGCCTCGT GCAGCTCGAA ACGGGCATGT CCTTCGGCCG CTGGAGCCAG
CGCCTGCGGC TGATCGTGGC GCTGCAGTGG CTCACGTCGG GCCTTTCGGT GCAGCAGGTG
GCCCATGGCC TGGGCTACGA CTCGGTGAGC GCCTTCATCG CCATGTTCAG GAAGGCCATG
GGCCAGCCGC CCGCGCGTTA TCTTGCGCGG CGCCGCTAG
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| Protein sequence | MRNATDESSG DARIRMPAGR LNMRKSGQDE RLGTHRQGAW TFEFDKMEAR VAAVRIRTEA
LAEGLPAHQH PQGQLAMVLR GTVTCEVPGA LWMAPLHGGL WIPGGVPHSL RVSAEGNVCF
LFVEDAAAAM PQTCCSLSVS PLLRELILYL AALPEGAQRE PQALRLHAVL LDQLARMPTE
AMHLPVSEEP RLRRLIDALM RDPADRTTAA QWASRLAMSE RTLTRLVQLE TGMSFGRWSQ
RLRLIVALQW LTSGLSVQQV AHGLGYDSVS AFIAMFRKAM GQPPARYLAR RR
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