Gene Vapar_5419 details

Gene Information

• Locus tag: Vapar_5419
• ID: 7975113
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: +
• Start bp: 125205
• End bp: 125834
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644796007
• Product: flavoprotein WrbA
• Protein accession: YP_002947281
• Protein GI: 239820096
• COG category: [R] General function prediction only
• COG ID: [COG0655] Multimeric flavodoxin WrbA
• TIGRFAM ID: [TIGR01755] NAD(P)H:quinone oxidoreductase, type IV

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAAAC CCAAGGTCCT CATCGCTTTC TATTCCCGCA ACAGCTCCAC CGAGCTTCTT 
GCCAAGGCCG TCGCCCAAGG CGCCATGGCC GAAGGCGCGG AAGTGCGCCT TCGCCGCGCG 
CGGGAGTTCG TCGCACCCGA GGTCATGCGC CAGGTGCCCG AGTGGTCCGA GCGGGCCAGC 
GAGATGAACG CCAAGTACGA AGCCCCGACC GAGGCGGACG CCGATTGGGC CGACGCCATC 
GTCTTCGGCA CGCCGACGCG CTTCGGCTCC ATTGCCGCCG AGCTCAAGGC CTACATCGAT 
TCGCTCGGCG GCCTCTGGTT CCAGGGCAAG CTCAACGGCA AGGCCGGCTC GGTGTTCGGC 
TCGACCTCTT CCAGGCACGG CGGCAACGAG GCGACGCTGC TGTCGCTCTA CGGCCCGATG 
GCGCACCTGG GCCTGATCAT CGTGCCGCTC GGCTATGCCG ATCCGGCCAT GTTCGCGGCG 
GGCACGCCCT ACGGTGCGAC CCACGTCTCC AACCGCGATT CGGTGATGCC CGGCGCCGAG 
GACCTGGCCG TCGCGACCTA CCAGGGCCGG CGCGTCGCCA CGGTGGCGCG GTCGCTGCGC 
GTGGCGCAGC CGGTGCCGGA AGCCGCCTGA 

 

Protein sequence

MSKPKVLIAF YSRNSSTELL AKAVAQGAMA EGAEVRLRRA REFVAPEVMR QVPEWSERAS 
EMNAKYEAPT EADADWADAI VFGTPTRFGS IAAELKAYID SLGGLWFQGK LNGKAGSVFG 
STSSRHGGNE ATLLSLYGPM AHLGLIIVPL GYADPAMFAA GTPYGATHVS NRDSVMPGAE 
DLAVATYQGR RVATVARSLR VAQPVPEAA