| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5416 |
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| Symbol | |
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| ID | 7975110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 122437 |
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| End bp | 123324 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796004 |
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| Product | tryptophan 23-dioxygenase |
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| Protein accession | YP_002947278 |
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| Protein GI | 239820093 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3483] Tryptophan 2,3-dioxygenase (vermilion) |
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| TIGRFAM ID | [TIGR03036] tryptophan 2,3-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACA CCCCCACCCT TGCGGCCATC GAACGCCCCG CGTCCGGCCA GACACCCTAC
AGCGCATGGA TGCAGACCGA CACCTTGCAC TCGCTGCAGC GTACCGTCAG CGACCACCCG
GGCGAGCACG CCTGGATCGT GCATGTGCAG GTGTCCGAGC TCTACTGGAT GCTCATCATC
AAGGAGATCC AGTCGGCCCA GGCGTTCCTG CGGGCCGACG ACCTCCCGCA GGCCTGGCGC
ACGTTGCAGC GCGTCGTTGC GCACCATGCG CCGCTGGACG CCATCTGGCG CTCGATCGAC
TGGATGACGC CGAACGACCT GCTCGCGATC CTTTCACGCG CGGTCGCCAC GCACGGCAAG
GACACGGCGC TGCAAGGCTG GACCTACCGG CAGATGGTCT ATCTGCTGGG CATCAAGCAG
GCCGAGCACC TGCAGCATTT CGAGCCCCAG CCCCATCGCT GGGAACAGCT CAACAAGGCG
CTGGCCGAAC CCAGCCTGTA CGACGACGTG CTCGCCTTCC TCCGGCGCCG GGGGCTGGGC
GTGCCGGCCG AATTGCTGGC GCGCGACCTG GCCGCGCCCT ACACGCCCCG CAAGGAGGTC
GAAGAGGTCT GGCGCCAGAT CTACGCCGAC CCCAACGCGA ACATCGAGCT CCAGCAGCTC
GGCGAGACCC TGGCCGACAT CGCCGAGGGC TTCTGCAACT GGAAATTCCG CCACCTGATG
GCGACGCGGC GAACCTTCGG TGCACGGCCG GCCTACTTCG GCACCGAAGG CGTTGCGTGG
CTCGTGCCCA CGATGGACGA GATTCCTTTT CCCGAGCTCT GGTCGGCGCG CACCTTCATC
GGTGACCCGC CGCCCGCGTG CCCGCACATG GCCCGGCAGG GGAAATGA
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| Protein sequence | MSNTPTLAAI ERPASGQTPY SAWMQTDTLH SLQRTVSDHP GEHAWIVHVQ VSELYWMLII
KEIQSAQAFL RADDLPQAWR TLQRVVAHHA PLDAIWRSID WMTPNDLLAI LSRAVATHGK
DTALQGWTYR QMVYLLGIKQ AEHLQHFEPQ PHRWEQLNKA LAEPSLYDDV LAFLRRRGLG
VPAELLARDL AAPYTPRKEV EEVWRQIYAD PNANIELQQL GETLADIAEG FCNWKFRHLM
ATRRTFGARP AYFGTEGVAW LVPTMDEIPF PELWSARTFI GDPPPACPHM ARQGK
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