| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5415 |
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| Symbol | |
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| ID | 7975109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 121037 |
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| End bp | 122440 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796003 |
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| Product | Amidase |
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| Protein accession | YP_002947277 |
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| Protein GI | 239820092 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACGCCG ATTGCCCGCC ATCTCCCGTG GCCCCTTCCG CATCCAGCCT GCGCCACGCG
CTCGACGCCC TGGCCGCCCG GCGCATCACG GCCGTGGCCC TGATCGAGCA GGCACTCGAG
GCCGCACAGG CCAGCAAGCG CGACCTGCGC GCCTTCGCCG CCATCGACCG GGACGGCGCG
CTGGCCGCCG CGGCAGAAAG CGACAGGCGC TATGCGCAAG GCCGGCAACG GCCGCTGGAA
GGGCTGGCCA TCGGCGTCAA GGACCTGATC GACACCCAAG GCATCGAAAC CAGCTACGGC
TCGGCCGCCT ACCTGGGGCA CCTTCCGGAC GCCGACGCCG ACGTGGTGCG CGCGCTGATC
GAGCGCGGCG CCATTCCCGT CGGCAAGACG GCCACGCATG AATTCGCATG GGGCGTGACC
ACGGCCAGCG CCACCTTCGG CGACACCTTG AACCCGCTGG ACCGCACACG CATTCCCGGC
GGCTCCAGCG GCGGCGCGGC CGCGGCGATT GCCTGTGGCG CCGTGGCGGC CGGCCTTGGC
ACGGACACCG GCGGATCGGT GCGGATCCCG GCCGCGCTGT GCGGGGTCGT CGGCTTCAAG
CCGAGCTTCG GCGCACTGCC CACGCGCGGC ATCTTTGCAC TGGCACCGAC GCTGGACCAC
CCGGGCTTTC TTGGCGCGAC GGTCGACGAC GTCGCGCTGC TGGCGGGCGC ATTCCACATC
GAAATGCCGC AGCACGCCGC TTCTCCATCT GCGCGCCTCG GGGTGGTGCG CGAGATCGCG
CCCGTGCCGC CGAGCGCCGA AGTCGCATCC GCGTTCGACA CCGCGGTTGC GAAGCTCGGA
GAATTCCTTG CGTGCACGAC CGTCGATGCG CCCGGACTGT TCGACGGCGT CTTCGAGGCC
TTTGCGCACA TCGTCCTCAC CGAGGGCGGC GTCGAGCACT TCCGCCGCAA CGCCACCGAT
CGCATCGCTA CCCACTACGG CCGCGAAACC ATCGAGCGGC TCGAGCGCGC CAAGAGCATC
ACGCTGGGCG ACTACGCGCG CGCGCAGCAG GCGCGGCGCG ACTTCACCGC CCGGCTGCAT
CGCGCCATGT CGCAGCTCGA CTACCTCGTG CTGCCGACCT GCCCCTGCAC CGCGCCGCAG
GTGAATCAGG CATCGATCGA TATCGGCCAT TGGTCGGGCA CCGTGCGCGA GGCGCTGATG
ACCTACACGG CGCCTTTCAA CGTCGCGGGG TTCCCGGCCA TCTCGATTCC CCTTGCCGCC
CGCGACGGCC GCCTGCCCGC CGGGCTGCAG ATCGTGGCGA AGCCTGGCCG CGACGGCGCC
CTGCTGCAGA TCGCACAGCA GATCGAAGGC CTCATGCACA CCGGCACATC GACGCATCCC
CCCACCACCA GGAGCACACC ATGA
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| Protein sequence | MNADCPPSPV APSASSLRHA LDALAARRIT AVALIEQALE AAQASKRDLR AFAAIDRDGA
LAAAAESDRR YAQGRQRPLE GLAIGVKDLI DTQGIETSYG SAAYLGHLPD ADADVVRALI
ERGAIPVGKT ATHEFAWGVT TASATFGDTL NPLDRTRIPG GSSGGAAAAI ACGAVAAGLG
TDTGGSVRIP AALCGVVGFK PSFGALPTRG IFALAPTLDH PGFLGATVDD VALLAGAFHI
EMPQHAASPS ARLGVVREIA PVPPSAEVAS AFDTAVAKLG EFLACTTVDA PGLFDGVFEA
FAHIVLTEGG VEHFRRNATD RIATHYGRET IERLERAKSI TLGDYARAQQ ARRDFTARLH
RAMSQLDYLV LPTCPCTAPQ VNQASIDIGH WSGTVREALM TYTAPFNVAG FPAISIPLAA
RDGRLPAGLQ IVAKPGRDGA LLQIAQQIEG LMHTGTSTHP PTTRSTP
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