Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5397 |
Symbol | |
ID | 7975858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 99421 |
End bp | 99654 |
Gene Length | 234 bp |
Protein Length | 77 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644795987 |
Product | hypothetical protein |
Protein accession | YP_002947261 |
Protein GI | 239820076 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.478102 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAAAA GAATCATTCT TGCGGCACTG CTGACCAGTC TCGCGACCTC GATCTCGATC TATGCGATCC AGCCGGCCAT TGCTGTCGCG CTTCCCGCCG CAACCACCGA GGCCCCGGTC GCAAGCCCGT TCCACTCACT CGATATTTCG TATCCGGCGC CACAAGAGCC CCTGGACCTC ACGCCGATCA CGCCGACAGA AACAGTGGGT GCCGCGAAGT ACGAGCCCTT CTGA
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Protein sequence | MTKRIILAAL LTSLATSISI YAIQPAIAVA LPAATTEAPV ASPFHSLDIS YPAPQEPLDL TPITPTETVG AAKYEPF
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