| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5380 |
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| Symbol | |
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| ID | 7975841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 86114 |
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| End bp | 87376 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795974 |
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| Product | Carboxymethylenebutenolidase |
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| Protein accession | YP_002947248 |
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| Protein GI | 239820063 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.204007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACA CCATCGACAT TCCGGCCGGC GACGGCACCC AGACCTTTCG CGGCTACCTG
GCCCTGCCCG CCTCGGGCCG CGGCCCCGGC ATCGTGCTGT GCCAGGAGAT CTTCGGCATC
AACGACTACG TGCGCGAGGT GGCCGACCTC TACGCCGAAG AAGGCTACGT GGTGCTCGCG
CCCGACCTGT TCTGGCGCAT GGAGCCCGGC GTCGAGCTCG GCTACTCGCC CGAAGACTGG
CAGCGCGCCT TCGGCTTCTT CCAGAAGTTC GACATCGAGG CCGGCGTGGC CGACGTCACG
GCCAGCGTGA AGGCGCTGCG TGCGCACCCG GCCTGCACCG GCAAGGTCGG CGCGCTGGGC
TTCTGCCTCG GCGGCAAGCT GGCCTACCTG GCCGCCGCGC ACTCGGGCGT GGACGCGGCC
GTGGGCTACT ACGGCGTGGG CATCGAGGGC GCGCTCGACC TGGTGCCGAA GATCGATTGC
CCCATTGCGC TGCACTTTGC CGAGCTCGAC CAGTTCTGCC CGCCCGAGGC CCGCGCCCAG
GTGCTCGCGG CCTTCGCCGG CAAGCCCGCT GCGCACATGT ATGTCTACCC GGGCGTCGAC
CATGCGTTCG CGCGCACCGG CGGCGAGCAT TTCGACAAGC CCTCCACGCT CATGGCGCAC
CAGCGCTCGA TGGCGCTGTT CAAGGAAGCG ATCGGCCCGG TGTACGACCT CTCGGCGCTG
TGGGACAAGC ACTGCGAGTA CGAGTTCGCC ACGCGCGACG TGGTCGCCAC CATGGCCACG
ATGGTGAGCG AGCCCTATGT GAACCACATC CCGACCATGA CCGGCGGCGT CGGCGCCAGG
GAGCTGTCGC GCTTCTACAA GCACCACTTC ATTCCGACGA CGCCGCCCGA TACGCGGCTC
ACGCCCATCT CGCGCACGGT GGGTGCGACG CAGATCGTGG ACGAGATGCT GTTCAGCTTC
ACCCACACGG TCGAGATCGA TTGGCTGCTC CCGGGCATCG CGCCCACCGG CAGGGCGGTG
GAGATTCCGC TCGTGGCCAT CGTGAAGTTC CGCGGCGACA AGCTCTACCA CGAGCACATC
TACTGGGACC AGGCCAGCGT GCTGGTGCAG ATCGGCCTGC TCGATCCGAA GGGCCTGCCC
GTGGCCGGCG CCGAGACGGC GCGCAAGCTG GTCGACGAAA CGCAGCCGTC GAACACGCTG
ATGCCGCGCT GGAAAAAATC GGCCGCGCTC ACCATCGCCG ATCCGGCGCT GCCCTTGGGA
TGA
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| Protein sequence | MSDTIDIPAG DGTQTFRGYL ALPASGRGPG IVLCQEIFGI NDYVREVADL YAEEGYVVLA
PDLFWRMEPG VELGYSPEDW QRAFGFFQKF DIEAGVADVT ASVKALRAHP ACTGKVGALG
FCLGGKLAYL AAAHSGVDAA VGYYGVGIEG ALDLVPKIDC PIALHFAELD QFCPPEARAQ
VLAAFAGKPA AHMYVYPGVD HAFARTGGEH FDKPSTLMAH QRSMALFKEA IGPVYDLSAL
WDKHCEYEFA TRDVVATMAT MVSEPYVNHI PTMTGGVGAR ELSRFYKHHF IPTTPPDTRL
TPISRTVGAT QIVDEMLFSF THTVEIDWLL PGIAPTGRAV EIPLVAIVKF RGDKLYHEHI
YWDQASVLVQ IGLLDPKGLP VAGAETARKL VDETQPSNTL MPRWKKSAAL TIADPALPLG
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