| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5375 |
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| Symbol | |
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| ID | 7975836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 81354 |
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| End bp | 82118 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795969 |
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| Product | malonate transporter, MadM subunit |
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| Protein accession | YP_002947243 |
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| Protein GI | 239820058 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00808] malonate transporter, MadM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0760178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAAA TCCTCGAAAA AGCCGCGCTC CAGAACGGCC TCGTGACCGC CTTTGCGGTG
GTCGGCCTGG TGATCCTGCT GTCGGGCCAG ATCTCGCGCC GGCTGACCTT CGGCCGCGTG
CACGGCTCGG CCATCGCGAT CGTGATCGGC CTGGCGCTCG CCTACTGGGG CGGCACGCAG
ACCGGCGGCC ACAAGGGCCT GGCCGACATG TCGCTGTTCG GCGGCATCGG GCTGATGGGC
GGCGCGATGC TGCGCGACTT CGCGATCGTG GCCACCGCCT TCGAAGTGCA GGCCACCGAG
GCGCGCAAGG CCGGGCTGAT CGGCGTGGTG TCGCTGCTGC TGGGCACGGT GCTGCCCTTC
ATCGTGGGCG CATGCATTGC ACGCGCCTTC GGCTACTCCG ACGCAGTGAG CATGACCACC
ATCGGCGCCG GCGCGGTCAC CTACATCGTC GGCCCGGTGA CGGGCGCGGC CATCGGTGCG
AGCCCGGACG TGATGGCGCT GAGCATTGCG ACGGGGCTGG TCAAGGCCAT CATCGTGATG
GTGGGCACGC CCATCGCAGC GCGCTTCCTC GCACTGAAGA CGCCGCGCTC GGCAATGGTG
TTCGGCGGCC TCGCAGGCAC CGTGAGCGGT GTTTCCGCCG GCCTTGCCGC GACCGACCGC
AAGCTGGTGC CCTACGGCGC GCTCGTCGCG ACCTTTCACA CCGGCCTGGG CTGCCTGATG
GGGCCGTCGG TGCTGTTTTT TGCCACCAAG GCATTGGTGG GTTGA
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| Protein sequence | MIEILEKAAL QNGLVTAFAV VGLVILLSGQ ISRRLTFGRV HGSAIAIVIG LALAYWGGTQ
TGGHKGLADM SLFGGIGLMG GAMLRDFAIV ATAFEVQATE ARKAGLIGVV SLLLGTVLPF
IVGACIARAF GYSDAVSMTT IGAGAVTYIV GPVTGAAIGA SPDVMALSIA TGLVKAIIVM
VGTPIAARFL ALKTPRSAMV FGGLAGTVSG VSAGLAATDR KLVPYGALVA TFHTGLGCLM
GPSVLFFATK ALVG
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