Gene Vapar_5359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5359 
Symbol 
ID7975820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp64112 
End bp64582 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content71% 
IMG OID644795953 
Producttranscriptional regulator, MarR family 
Protein accessionYP_002947227 
Protein GI239820042 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.157923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACGC TCCCCGCACC GCAGGCGGCC GATGCCGCCG GCCCCGAGCG GCCGGCCTGC 
ACCTACACCA CGGCGCATCA GCTCGCCCGC CTCGTCAGGC AGCACTACGA CGCGGAACTG
GGCGCCATCG GCCTCAGGGC CACGCAGTAC CGGCTGCTGG TGGAAATCCT CGCACATGGG
CCGGTGCGCC CCTGCGACCT GGCCGAGCGC ATGTCGCTCT CTCCCTCGAC GCTGACGCGC
AATCTCAAGC CGCTGATCGC GGCGGGATGG GTCGATCTTG GACCCGGGTT GGACGGACGC
ACCCGCAGTG TGTGCATCAC CGCTGCGGGC CGCGGCAAGT GTGCCGAGGG CCGGCCGCGC
TGGAGCCTGG CGCAGGCCAA GGTGCACCGG TTGATCGGGA GCCGGCAGGT CGGTGCCTTG
CATGCGCTCG TCGGCCAATG CTTGACGAGC ATGTCGGCGG CGGCCGAATG A
 
Protein sequence
MPTLPAPQAA DAAGPERPAC TYTTAHQLAR LVRQHYDAEL GAIGLRATQY RLLVEILAHG 
PVRPCDLAER MSLSPSTLTR NLKPLIAAGW VDLGPGLDGR TRSVCITAAG RGKCAEGRPR
WSLAQAKVHR LIGSRQVGAL HALVGQCLTS MSAAAE