Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5359 |
Symbol | |
ID | 7975820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 64112 |
End bp | 64582 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644795953 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_002947227 |
Protein GI | 239820042 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.157923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAACGC TCCCCGCACC GCAGGCGGCC GATGCCGCCG GCCCCGAGCG GCCGGCCTGC ACCTACACCA CGGCGCATCA GCTCGCCCGC CTCGTCAGGC AGCACTACGA CGCGGAACTG GGCGCCATCG GCCTCAGGGC CACGCAGTAC CGGCTGCTGG TGGAAATCCT CGCACATGGG CCGGTGCGCC CCTGCGACCT GGCCGAGCGC ATGTCGCTCT CTCCCTCGAC GCTGACGCGC AATCTCAAGC CGCTGATCGC GGCGGGATGG GTCGATCTTG GACCCGGGTT GGACGGACGC ACCCGCAGTG TGTGCATCAC CGCTGCGGGC CGCGGCAAGT GTGCCGAGGG CCGGCCGCGC TGGAGCCTGG CGCAGGCCAA GGTGCACCGG TTGATCGGGA GCCGGCAGGT CGGTGCCTTG CATGCGCTCG TCGGCCAATG CTTGACGAGC ATGTCGGCGG CGGCCGAATG A
|
Protein sequence | MPTLPAPQAA DAAGPERPAC TYTTAHQLAR LVRQHYDAEL GAIGLRATQY RLLVEILAHG PVRPCDLAER MSLSPSTLTR NLKPLIAAGW VDLGPGLDGR TRSVCITAAG RGKCAEGRPR WSLAQAKVHR LIGSRQVGAL HALVGQCLTS MSAAAE
|
| |