| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5357 |
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| Symbol | |
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| ID | 7975818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 61977 |
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| End bp | 63161 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795951 |
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| Product | acetyl-CoA acetyltransferase |
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| Protein accession | YP_002947225 |
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| Protein GI | 239820040 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.284642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGAAG CCGTCATCGT TTCCACCGCA CGCACGGGCA TCGGCCGCGC GTTCCGCGGC
GCATTGAACA ACATCAAGTC GCCCACGCTG ATGGGCCACG CGGTCCAGCA CGCCGTGCAG
CGGGCGGGCA TCGATCCCGG GGAAGTGGAG GACGTGGTGA TCGGCAGCGC GATGGCTGCC
GGCACCGCGG GCATGAACAT CGGGCGCCTC GCGGCGCTCG CAGCGGGCCT GCCGCAGTCG
GTGCCGGGCC AGACGATGGA CCGGCAGTGC GCCTCGGGCC TGATGGCCAT CGCGACGGCA
GCCAAGCAGA TCATCGTCGA CGGCATGGAT GTGACCGTGG GCGGCGGGCA GGAGAACATC
TCCGCCGTGC AGAACCCCTT CGTCAAGTGG GTGGGCGAAG AGGCCGATCC GCTGCTCGTT
GCACGCGTGC AGCACGCCTA CATCCCGATG CTCCACACGG CCGAAATCGT CGCGAAGAAG
TACGGCATCT CGCGCGAGGT GCAGGACGCG TATTCGGCCG AAGCACAGCG CCGCACCGCG
CTCGCGCAGG AGCACCACCT GTTCGATGAC GAGATCGTGC CGATCACGGC GCGCATGGCC
GTGGCCGACA AGCAGACGGG CGCGGTCAGC TACCGCGAGG TCACGCTCGA CCGCGACGAG
GGCAACCGCC CCGACACCAC GCTCGAAGGC CTTTCCCAGC TCAAGCCCGT CGTCGAAGGC
GGCGTGATTA CCGCCGGCAA TTCGAGTCAG CTCTCGGATG GCGCATCGGC CTGCGTGCTG
GTGGAGCGCA CGGTTGCCGA GCGCCGCGGG CTCAAGGCGC TGGGCACCTA CCGCGGCATC
GCAGTGGCCG GCCTCGCGCC GGAAGAAATG GGCATCGGCC CGGTGCTGGC CGTGCCCAAG
CTGCTGAAGA CCCACGGGCT CACGGTGAAC GACATCGGCC TGTGGGAACT GAACGAGGCC
TTCGCCTGCC AGGTGCTGTA CTCGCGCGAT CGTCTGGGCA TCGACCCCGA GAAGCTGAAC
GTCAACGGCG GCGGCATCAC GATCGGCCAT CCCTACGGCA TGACCGGCTC GCGGCTGGTG
GGACATGCGC TCATCGAGGG CAAGCGGCGC GGCGCGCGCT TCGTCGTCGT GACGATGTGC
GTCGGCGGCG GCATGGGTGC CGCGGGCCTG TTCGAAGTGG CCTGA
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| Protein sequence | MREAVIVSTA RTGIGRAFRG ALNNIKSPTL MGHAVQHAVQ RAGIDPGEVE DVVIGSAMAA
GTAGMNIGRL AALAAGLPQS VPGQTMDRQC ASGLMAIATA AKQIIVDGMD VTVGGGQENI
SAVQNPFVKW VGEEADPLLV ARVQHAYIPM LHTAEIVAKK YGISREVQDA YSAEAQRRTA
LAQEHHLFDD EIVPITARMA VADKQTGAVS YREVTLDRDE GNRPDTTLEG LSQLKPVVEG
GVITAGNSSQ LSDGASACVL VERTVAERRG LKALGTYRGI AVAGLAPEEM GIGPVLAVPK
LLKTHGLTVN DIGLWELNEA FACQVLYSRD RLGIDPEKLN VNGGGITIGH PYGMTGSRLV
GHALIEGKRR GARFVVVTMC VGGGMGAAGL FEVA
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